Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene21656 SustainPine v3.0 291
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 2.0e-06
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene21772 SustainPine v3.0 493
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene21838 SustainPine v3.0 1609
AutoFact: anaphase promoting complex subunit 4 [Arabidopsis thaliana] 0.0
FL-Next: sp=Anaphase-promoting complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene21868 SustainPine v3.0 568
AutoFact: Eukaryotic translation initiation factor 5A-1 n=3 Tax=Schizosaccharomyces pombe RepID=IF5A1_SCHPO 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
Complete
sp_v3.0_unigene21912 SustainPine v3.0 749
AutoFact: Actin binding protein n=1 Tax=Dictyostelium purpureum RepID=F0ZVC2_DICPU 0.0
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
C-terminus
sp_v3.0_unigene22016 SustainPine v3.0 874
AutoFact: PREDICTED: similar to wd-repeat protein [Nasonia vitripennis] 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22262 SustainPine v3.0 358
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAF97963.1|AC000103_13 F21J9.19 [Arabidopsis thaliana] gb|AAK76647.1| unknown protein [Arabidopsis thaliana] gb|AAL85055.1| unknown protein [Arabidopsis thaliana] gb|AEE30544.1| transduc 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: F-box and wd40 domain protein, putative 1.362e-10
Internal
sp_v3.0_unigene22431 SustainPine v3.0 2096
AutoFact: NLE multi-domain protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_45, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene22526 SustainPine v3.0 1624
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 8.705e-12
Complete
sp_v3.0_unigene22932 SustainPine v3.0 1851
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene23498 SustainPine v3.0 2691
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAM26669.1| AT4g16650/dl4350w [Arabidopsis thaliana] gb|AAN18192.1| At4g16650/dl4350w [Arabidopsis thaliana] dbj|BAD43586.1| growth regulator like protein [Arabidopsis thaliana] gb|AEE83780.1| 0.0
FL-Next: sp=DUF246 domain-containing protein At1g04910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative auxin-independent growth promoter 1.016e-25
Complete
sp_v3.0_unigene23536 SustainPine v3.0 1413
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS 0.0
C-terminus
sp_v3.0_unigene23561 SustainPine v3.0 708
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SED3_RICCO 8.0e-08
FL-Next: sp=Tryptophan aminotransferase-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene23688 SustainPine v3.0 4284
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein-like 2.809e-13
Complete
sp_v3.0_unigene24325 SustainPine v3.0 1171
AutoFact: DUF150 domain containing protein 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene24351 SustainPine v3.0 2182
AutoFact: pfam12490, BCAS3, Breast carcinoma amplified sequence 3 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene25189 SustainPine v3.0 2515
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001078546.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB10005.1| WD-repeat protein-like [Arabidopsis thaliana] gb|AAK96726.1| WD-repeat protein-like [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25440 SustainPine v3.0 1937
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AEC06823.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene25858 SustainPine v3.0 487
AutoFact: guanine nucleotide binding protein beta polypeptide 2-like 1 [Lethenteron japonicum] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 1.034e-18
C-terminus
sp_v3.0_unigene26271 SustainPine v3.0 699
AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 5.035e-28
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain