Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene200243 SustainPine v3.0 746
• AutoFact: ARp2/3 compleX component family member (arx-3) [Caenorhabditis elegans] emb|CAB54510.1| C. elegans protein Y79H2A.6, confirmed by transcript evidence [Caenorhabditis elegans] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene200402 SustainPine v3.0 522
• AutoFact: Coronin n=1 Tax=Naegleria gruberi RepID=D2VLM1_NAEGR 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene201378 SustainPine v3.0 562
• AutoFact: Translation initiation factor eIF-5A, promotes formation of the first peptide bond n=2 Tax=Pichia pastoris RepID=C4R6C4_PICPG 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.371e-28
Complete
sp_v3.0_unigene201648 SustainPine v3.0 635
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 9.0e-21
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-40 repeat protein-like 4.194e-07
Internal
sp_v3.0_unigene201873 SustainPine v3.0 504
• AutoFact: Translation initiation factor eIF-5A family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23BQ5_TETTH 1.0e-36
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.818e-28
Putative Complete
sp_v3.0_unigene202139 SustainPine v3.0 993
• AutoFact: Os03g0569900 protein (Fragment) n=5 Tax=Oryza sativa RepID=Q0DQQ8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear acid binding protein, putative 1.212e-22
C-terminus
sp_v3.0_unigene202620 SustainPine v3.0 588
• AutoFact: Ribosomal protein L21 n=1 Tax=Lepidochitona cinerea RepID=E3P7F3_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
Complete
sp_v3.0_unigene202891 SustainPine v3.0 517
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.84e-10
N-terminus
sp_v3.0_unigene203061 SustainPine v3.0 576
• AutoFact: Probable 60s ribosomal protein L21-A n=2 Tax=Ustilaginaceae RepID=E6ZV43_9BASI 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene203573 SustainPine v3.0 550
• AutoFact: Ribosomal protein L21 n=8 Tax=Endopterygota RepID=D1LYQ2_MANSE 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.471e-10
Complete
sp_v3.0_unigene203714 SustainPine v3.0 516
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=5 Tax=core eudicotyledons RepID=IF5A1_ARATH 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.371e-28
Complete
sp_v3.0_unigene204434 SustainPine v3.0 571
• AutoFact: Probable 60s ribosomal protein L21-A n=2 Tax=Ustilaginaceae RepID=E6ZV43_9BASI 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
Complete
sp_v3.0_unigene204566 SustainPine v3.0 438
• AutoFact: Eukaryotic translation initiation factor 5A-2 n=3 Tax=Ascaris suum RepID=F1L9I9_ASCSU 8.0e-30
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 7.476e-28
Putative Complete
sp_v3.0_unigene204586 SustainPine v3.0 553
• AutoFact: Ribosomal protein L21e n=1 Tax=Sphaerius sp. APV-2005 RepID=Q4GXF5_9COLE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.126e-10
Complete
sp_v3.0_unigene205004 SustainPine v3.0 545
• AutoFact: ribosomal protein L21, putative [Ixodes scapularis] gb|AAY66944.1| ribosomal protein L21 [Ixodes scapularis] gb|EEC03119.1| ribosomal protein L21, putative [Ixodes scapularis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
Complete
sp_v3.0_unigene206064 SustainPine v3.0 500
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
N-terminus
sp_v3.0_unigene206440 SustainPine v3.0 490
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=5 Tax=core eudicotyledons RepID=IF5A1_ARATH 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 4.954e-28
Putative Complete
sp_v3.0_unigene206705 SustainPine v3.0 643
• AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene207803 SustainPine v3.0 515
• AutoFact: Drought-sensitive 1 protein n=2 Tax=Arabidopsis RepID=Q9SAI7_ARATH 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene207810 SustainPine v3.0 498
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 3.0e-36
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 7.894e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain