Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene167149 SustainPine v3.0 205
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RKG4_RICCO 3.0e-25
• FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene167471 SustainPine v3.0 255
• AutoFact: WD40 repeat-containing protein [Dictyostelium discoideum AX4] sp|Q55FJ2.1|WDR91_DICDI RecName: Full=WD repeat-containing protein 91 homolog gb|EAL73495.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene167489 SustainPine v3.0 227
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-2-like 1-like n=5 Tax=Amniota RepID=UPI0001D62689 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene167500 SustainPine v3.0 176
• AutoFact: Unassigned protein 0.0001
unknown
sp_v3.0_unigene167606 SustainPine v3.0 229
• AutoFact: putative WD-40 repeat protein family [Oryza sativa Japonica Group] dbj|BAD30810.1| WD-40 repeat protein-like [Oryza sativa Japonica Group] 4.0e-25
• FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene168283 SustainPine v3.0 156
• AutoFact: cell division cycle 20, cofactor of APC complex [Arabidopsis thaliana] emb|CAB38785.1| WD-repeat protein-like protein [Arabidopsis thaliana] emb|CAB80044.1| WD-repeat protein-like protein [Arabidopsis thaliana] gb|ABG48494.1| At4g33270 [Arabidopsis thalia 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle, putative 3.204e-07
Internal
sp_v3.0_unigene170036 SustainPine v3.0 237
• AutoFact: GRP multi-domain protein 1.0e-10
• Sma3: Putative glycine-rich protein 2.016e-08
coding
sp_v3.0_unigene183247 SustainPine v3.0 607
• AutoFact: Peptidyl-prolyl cis-trans isomerase-like 3 n=2 Tax=Dictyostelium RepID=PPIL3_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene183345 SustainPine v3.0 227
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene183535 SustainPine v3.0 382
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein-like 1.933e-13
C-terminus
sp_v3.0_unigene183676 SustainPine v3.0 767
• AutoFact: WD-repeat protein, putative 1.00053e-42
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene183793 SustainPine v3.0 281
• AutoFact: Unassigned protein
• FL-Next: Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS 0.0
Internal
sp_v3.0_unigene183938 SustainPine v3.0 399
• AutoFact: WD-repeat protein [Capsella rubella] 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene184235 SustainPine v3.0 713
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
C-terminus
sp_v3.0_unigene184781 SustainPine v3.0 116
• AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 7.0e-10
• FL-Next: sp=Elongator complex protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene185774 SustainPine v3.0 376
• AutoFact: [R] COG2319 FOG: WD40 repeat 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box and wd40 domain protein, putative 6.72e-14
Internal
sp_v3.0_unigene185782 SustainPine v3.0 679
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene186092 SustainPine v3.0 347
• AutoFact: 60s ribosomal protein L21 [Triticum aestivum] 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.372e-10
Putative C-terminus
sp_v3.0_unigene186106 SustainPine v3.0 554
• AutoFact: RL21, ribosomal protein 21, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YNM6_THAPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene186335 SustainPine v3.0 530
• AutoFact: F-box protein 2 [Arabidopsis thaliana] ref|NP_001190352.1| F-box protein 2 [Arabidopsis thaliana] sp|Q94AD8.1|FBW3_ARATH RecName: Full=F-box/WD-40 repeat-containing protein At5g21040 gb|AAK82516.1| T10F18_70/T10F18_70 [Arabidopsis thaliana] gb|AAO11609.1| 2.0e-12
• FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain