Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene159645 SustainPine v3.0 218
AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-40 repeat-containing protein MSI1 6.427e-09
Internal
sp_v3.0_unigene159971 SustainPine v3.0 280
AutoFact: WD-40 repeat family protein [Musa acuminata] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene160028 SustainPine v3.0 445
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9T585_PHYPA 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase pp2a regulatory subunit B, putative 5.266e-12
Putative Complete
sp_v3.0_unigene160058 SustainPine v3.0 499
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13 [Arabidopsis thaliana] gb|AAF35413.1| unknown protein [Arabidopsis thaliana] dbj|BAB02376.1| WD-40 repeat protein-like [Arabidopsis thaliana] gb|A 1.0e-36
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: WD-40 repeat protein-like 3.105e-07
Internal
sp_v3.0_unigene160126 SustainPine v3.0 443
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene160162 SustainPine v3.0 410
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB11582.1| unnamed protein product [Arabidopsis thaliana] gb|AED96466.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 3.451e-14
Internal
sp_v3.0_unigene160224 SustainPine v3.0 400
AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 4.034e-10
N-terminus
sp_v3.0_unigene161091 SustainPine v3.0 427
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene161102 SustainPine v3.0 411
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Putative C-terminus
sp_v3.0_unigene161276 SustainPine v3.0 452
AutoFact: Cellulose synthase-like protein D1 n=2 Tax=Oryza sativa RepID=CSLD1_ORYSJ 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene161436 SustainPine v3.0 480
AutoFact: Probable HYP2-translation initiation factor eIF5A.1 n=2 Tax=Ustilaginaceae RepID=E6ZVD8_9BASI 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
Putative Complete
sp_v3.0_unigene161550 SustainPine v3.0 388
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: WD-repeat protein, putative 8.476e-06
Internal
sp_v3.0_unigene161583 SustainPine v3.0 407
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene161708 SustainPine v3.0 172
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 5.0e-08
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene161718 SustainPine v3.0 183
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb01g019530; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene161736 SustainPine v3.0 389
AutoFact: receptor for activated C kinase 1C [Arabidopsis thaliana] sp|Q9LV28.1|GPLPC_ARATH RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein C; AltName: Full=Receptor for activated C kinase 1C dbj|BAB02025.1| guanine nucleotide-binding pro 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.601e-18
Internal
sp_v3.0_unigene161833 SustainPine v3.0 117
AutoFact: pre-mRNA-processing factor 17 [Arabidopsis thaliana] gb|ABO38749.1| At1g10580 [Arabidopsis thaliana] gb|AEE28597.1| pre-mRNA-processing factor 17 [Arabidopsis thaliana] 4.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene162058 SustainPine v3.0 256
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Os09g0241100 protein 7.797e-06
Internal
sp_v3.0_unigene162624 SustainPine v3.0 191
AutoFact: Protein tipD, putative n=1 Tax=Ricinus communis RepID=B9RAQ4_RICCO 6.0e-06
FL-Next: tr=Nucleotide binding protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Protein tipD, putative 5.361e-06
N-terminus
sp_v3.0_unigene162690 SustainPine v3.0 424
AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9S2U6_RICCO 0.0
FL-Next: sp=Protein translocase subunit SECA2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein translocase subunit secA 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain