Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene155644 SustainPine v3.0 417
• AutoFact: Coronin n=1 Tax=Naegleria gruberi RepID=D2VLM1_NAEGR 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene155666 SustainPine v3.0 353
• AutoFact: Peroxisomal targeting signal 2 receptor n=2 Tax=Dictyostelium RepID=PEX7_DICDI 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxisomal targeting signal type 2 receptor 4.479e-13
Internal
sp_v3.0_unigene155682 SustainPine v3.0 399
• AutoFact: Guanine nucleotide-binding protein subunit beta n=4 Tax=Dictyosteliida RepID=GBB_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 2.779e-11
C-terminus
sp_v3.0_unigene155813 SustainPine v3.0 377
• AutoFact: WD40 repeat-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PV07_9MYCE 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene155927 SustainPine v3.0 474
• AutoFact: Activated protein kinase C receptor RACK1-rat, putative n=3 Tax=Chromadorea RepID=A8Q1C2_BRUMA 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.673e-19
C-terminus
sp_v3.0_unigene156028 SustainPine v3.0 557
• AutoFact: Coronin-like protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MTM0_PHYIT 0.0
• FL-Next: tr=Coronin-like protein, putative; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
Internal
sp_v3.0_unigene156067 SustainPine v3.0 343
• AutoFact: Coronin-like protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MTM0_PHYIT 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene156104 SustainPine v3.0 604
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.316e-09
C-terminus
sp_v3.0_unigene156214 SustainPine v3.0 495
• AutoFact: Initiation factor 5a n=1 Tax=Flammulina velutipes RepID=D2JY86_FLAVE 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
N-terminus
sp_v3.0_unigene156342 SustainPine v3.0 522
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene156377 SustainPine v3.0 425
• AutoFact: Ribosomal protein L21e n=1 Tax=Sphaerius sp. APV-2005 RepID=Q4GXF5_9COLE 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
N-terminus
sp_v3.0_unigene156437 SustainPine v3.0 453
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] emb|CAL56484.1| GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene156598 SustainPine v3.0 358
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Oikopleura dioica RepID=E4YT26_OIKDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene156616 SustainPine v3.0 450
• AutoFact: Guanine nucleotide binding protein beta subunit-like protein n=1 Tax=Thalassiosira pseudonana RepID=B8BQ72_THAPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
Internal
sp_v3.0_unigene156845 SustainPine v3.0 408
• AutoFact: Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8ILK1_CHLRE 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156925 SustainPine v3.0 313
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC99_PHYIT 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157032 SustainPine v3.0 494
• AutoFact: heterotrimeric guanine nucleotide-binding protein beta subunit [Bombyx mori] gb|ABF51460.1| heterotrimeric guanine nucleotide-binding protein beta subunit [Bombyx mori] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 3.28e-11
Putative C-terminus
sp_v3.0_unigene157108 SustainPine v3.0 384
• AutoFact: 60S ribosomal protein L21-1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MS26_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 7.152e-14
N-terminus
sp_v3.0_unigene157120 SustainPine v3.0 334
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 5.0e-07
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene157323 SustainPine v3.0 504
• AutoFact: Herpes_gp2 multi-domain protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain