Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene166359 SustainPine v3.0 453
• AutoFact: Unassigned protein 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene166589 SustainPine v3.0 489
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Leptosphaeria maculans RepID=E5A619_LEPMC 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene166650 SustainPine v3.0 237
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAO14644.1|AF474176_1 pollen-specific calmodulin-binding protein [Arabidopsis thaliana] gb|ACI49798.1| At2g43040 [Arabidopsis thaliana] gb|AEC10202.1| tetratricopeptide repeat-containin 5.0e-12
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene166678 SustainPine v3.0 305
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Piriformospora indica RepID=C6KGV3_PIRIN 2.0e-23
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene166889 SustainPine v3.0 173
• AutoFact: putative multispanning membrane protein [Populus tremula x Populus alba] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transmembrane 9 superfamily protein member 1 1.76e-12
Internal
sp_v3.0_unigene166968 SustainPine v3.0 371
• AutoFact: putative MAP kinase kinase kinase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Map3k delta-1 protein kinase, putative 3.907e-25
Internal
sp_v3.0_unigene167010 SustainPine v3.0 197
• AutoFact: Chloroplast Toc64-2 n=1 Tax=Physcomitrella patens RepID=Q6RJN6_9BRYO 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167020 SustainPine v3.0 217
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAB10514.1| unnamed protein product [Arabidopsis thaliana] gb|AED92407.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene167551 SustainPine v3.0 204
• AutoFact: Cell division cycle, putative n=1 Tax=Ricinus communis RepID=B9RKJ5_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167916 SustainPine v3.0 324
• AutoFact: Putaive copia-like retrotransposon polyprotein, 5'-partial (Fragment) n=2 Tax=Oryza sativa RepID=Q8W5D1_ORYSA 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.34e-35
Internal
sp_v3.0_unigene168037 SustainPine v3.0 186
• AutoFact: [L] COG0415 Deoxyribodipyrimidine photolyase 7.0e-08
• FL-Next: sp=Cryptochrome DASH, chloroplastic/mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.439e-08
Internal
sp_v3.0_unigene168077 SustainPine v3.0 204
• AutoFact: Putative TPR domain containing protein, identical [Solanum demissum] 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168128 SustainPine v3.0 256
• AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 5.061e-11
Internal
sp_v3.0_unigene170036 SustainPine v3.0 237
• AutoFact: GRP multi-domain protein 1.0e-10
• Sma3: Putative glycine-rich protein 2.016e-08
coding
sp_v3.0_unigene183215 SustainPine v3.0 864
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RHT2_RICCO 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 6.991e-19
Putative C-terminus
sp_v3.0_unigene183247 SustainPine v3.0 607
• AutoFact: Peptidyl-prolyl cis-trans isomerase-like 3 n=2 Tax=Dictyostelium RepID=PPIL3_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene183291 SustainPine v3.0 509
• AutoFact: DnaJ-like protein n=3 Tax=Arabidopsis RepID=Q8VZB6_ARATH 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperone protein dnaJ 49 8.172e-09
Putative N-terminus
sp_v3.0_unigene183630 SustainPine v3.0 325
• AutoFact: Peptidylprolyl isomerase, putative n=2 Tax=Ricinus communis RepID=B9T7Z2_RICCO 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene184050 SustainPine v3.0 551
• AutoFact: RecName: Full=Luminal-binding protein 5; Short=BiP 5; AltName: Full=78 kDa glucose-regulated protein homolog 5; Short=GRP-78-5; Flags: Precursor emb|CAA42660.1| luminal binding protein (BiP) [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene184189 SustainPine v3.0 561
• AutoFact: pre-mRNA splicing factor, putative 7.0e-38
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain