Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158140 SustainPine v3.0 237
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene158349 SustainPine v3.0 502
• AutoFact: Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Dictyostelium discoideum RepID=PPIB_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene158614 SustainPine v3.0 289
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Andropogoneae RepID=C5X6U8_SORBI 4.0e-24
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene158675 SustainPine v3.0 116
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastocystis hominis RepID=D8M872_BLAHO 4.0e-10
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 8.912e-20
Putative N-terminus
sp_v3.0_unigene158727 SustainPine v3.0 282
• AutoFact: Heat shock protein DnaJ n=1 Tax=Medicago truncatula RepID=A2Q503_MEDTR 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DnaJ-like protein 3.397e-13
Putative N-terminus
sp_v3.0_unigene158750 SustainPine v3.0 432
• AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Vaucheria litorea RepID=Q9ATC5_VAULI 7.0e-28
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene158765 SustainPine v3.0 428
• AutoFact: Peptidyl-prolyl cis-trans isomerase CYP20-1 n=2 Tax=Arabidopsis RepID=CP20A_ARATH 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene159438 SustainPine v3.0 488
• AutoFact: WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] emb|CAB96849.1| putative protein [Arabidopsis thaliana] gb|AED91612.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene159494 SustainPine v3.0 480
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.72e-14
C-terminus
sp_v3.0_unigene159581 SustainPine v3.0 412
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene159930 SustainPine v3.0 419
• AutoFact: Unassigned protein 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene159984 SustainPine v3.0 408
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase bri1, putative 3.052e-17
Internal
sp_v3.0_unigene160076 SustainPine v3.0 493
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6AUP9_ORYSJ 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.11e-09
Internal
sp_v3.0_unigene160354 SustainPine v3.0 417
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 2.801e-16
Internal
sp_v3.0_unigene160902 SustainPine v3.0 474
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9HI95_POPTR 2.0e-22
• FL-Next: tr=SET domain protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene161174 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161568 SustainPine v3.0 390
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IVI0_NOSP7 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl isomerase FKBP12 1.541e-12
Internal
sp_v3.0_unigene161721 SustainPine v3.0 460
• AutoFact: Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] gb|AED91808.1| Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein At2g41520 1.928e-08
Putative C-terminus
sp_v3.0_unigene161763 SustainPine v3.0 439
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 5.0e-37
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.627e-16
Putative C-terminus
sp_v3.0_unigene162055 SustainPine v3.0 377
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 2.283e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain