Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene141180 SustainPine v3.0 320
• AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin light chain, putative 7.536e-11
Putative C-terminus
sp_v3.0_unigene141336 SustainPine v3.0 314
• AutoFact: rotamase FKBP 1 [Arabidopsis thaliana] sp|Q38931.2|FKB70_ARATH RecName: Full=70 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Peptidylprolyl isomerase ROF1; AltName: Full=Rotamase gb|AAB82062 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidylprolyl isomerase 4.356e-11
Internal
sp_v3.0_unigene141816 SustainPine v3.0 490
• AutoFact: DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] ref|NP_850714.1| DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] emb|CAB68140.1| dnaJ-like protein [Arabidopsis thaliana] dbj|BAH19912.1| AT3G57340 [Arabidopsis thaliana] gb|AEE79643. 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142008 SustainPine v3.0 359
• AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillarin, putative 6.336e-08
Putative N-terminus
sp_v3.0_unigene142071 SustainPine v3.0 360
• AutoFact: Apc3 domain containing protein 8.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_114, whole genome shotgun sequence 9.897e-09
Internal
sp_v3.0_unigene142238 SustainPine v3.0 178
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI 5.0e-20
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene142776 SustainPine v3.0 311
• AutoFact: HSP associated protein like [Arabidopsis thaliana] emb|CAB79222.1| HSP associated protein like [Arabidopsis thaliana] 2.0e-11
• FL-Next: sp=FAM10 family protein At4g22670; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene142881 SustainPine v3.0 351
• AutoFact: Kinesin light chain-like protein n=1 Tax=Phaseolus vulgaris RepID=D2DWB2_PHAVU 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin light chain, putative 5.189e-11
C-terminus
sp_v3.0_unigene143239 SustainPine v3.0 751
• AutoFact: Protein SGT1 homolog B n=4 Tax=Brassicaceae RepID=SGT1B_ARATH 2.0e-35
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SGT1-2 1.521e-12
Complete
sp_v3.0_unigene143820 SustainPine v3.0 818
• AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
• FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_62, whole genome shotgun sequence 6.294e-06
Internal
sp_v3.0_unigene143970 SustainPine v3.0 489
• AutoFact: Putative tetratricopeptide repeat protein n=1 Tax=Oryza sativa RepID=Q8W378_ORYSA 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Abscisic stress ripening protein 5.589e-16
Putative C-terminus
sp_v3.0_unigene144038 SustainPine v3.0 331
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene144489 SustainPine v3.0 516
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene144555 SustainPine v3.0 830
• AutoFact: aldo/keto reductase family protein [Arabidopsis thaliana] dbj|BAB11492.1| aldose reductase-like protein [Arabidopsis thaliana] gb|AAY78879.1| aldo/keto reductase family protein [Arabidopsis thaliana] gb|AED97606.1| aldo/keto reductase family protein [Arab 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldo-keto reductase, putative 2.864e-33
N-terminus
sp_v3.0_unigene144766 SustainPine v3.0 751
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene144847 SustainPine v3.0 411
• AutoFact: putative universal stress protein [Mirabilis jalapa] 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Universal stress protein family protein, expressed 1.546e-07
C-terminus
sp_v3.0_unigene144980 SustainPine v3.0 1161
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TPR domain protein 3.433e-08
Putative Complete
sp_v3.0_unigene145187 SustainPine v3.0 585
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene145396 SustainPine v3.0 606
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene145456 SustainPine v3.0 476
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain