Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene63439 SustainPine v3.0 326
AutoFact: T24P13.14 n=3 Tax=Arabidopsis RepID=Q9LQX6_ARATH 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene63567 SustainPine v3.0 146
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene64149 SustainPine v3.0 189
AutoFact: Calmodulin-binding protein MPCBP n=2 Tax=Andropogoneae RepID=B6U2D5_MAIZE 8.0e-06
FL-Next: tr=Calmodulin-binding protein MPCBP; Zea mays (Maize). 0.0
Sma3: TPR Domain containing protein, expressed 3.274e-09
Internal
sp_v3.0_unigene65031 SustainPine v3.0 236
AutoFact: RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=PhSPY emb|CAA76834.1| SPINDLY protein [Petunia x hybrida] 5.0e-35
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 2.285e-24
Internal
sp_v3.0_unigene65040 SustainPine v3.0 236
AutoFact: pfam00875, DNA_photolyase, DNA photolyase 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.896e-12
Internal
sp_v3.0_unigene65795 SustainPine v3.0 170
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 4.0e-16
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene65986 SustainPine v3.0 311
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollenless3 1.049e-11
N-terminus
sp_v3.0_unigene66113 SustainPine v3.0 408
AutoFact: PAS domain-containing tyrosine kinase-like protein n=2 Tax=Arabidopsis RepID=Q9C902_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 1.893e-22
Internal
sp_v3.0_unigene66368 SustainPine v3.0 379
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein, having alternative splicing products; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene67294 SustainPine v3.0 377
AutoFact: XPA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9S614_RICCO 6.0e-31
FL-Next: tr=XPA-binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene67333 SustainPine v3.0 278
AutoFact: DNA photolyase, putative n=1 Tax=Ricinus communis RepID=B9SPQ7_RICCO 5.0e-09
FL-Next: sp=Cryptochrome DASH, chloroplastic/mitochondrial; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Internal
sp_v3.0_unigene67584 SustainPine v3.0 342
AutoFact: putative pre-mRNA splicing factor [Arabidopsis thaliana] 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative pre-mRNA splicing factor 3.477e-08
Internal
sp_v3.0_unigene67612 SustainPine v3.0 234
AutoFact: Cryptochrome DASH, chloroplastic/mitochondrial n=1 Tax=Solanum lycopersicum RepID=CRYD_SOLLC 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.826e-12
Internal
sp_v3.0_unigene68088 SustainPine v3.0 302
AutoFact: DNA photolyase, putative n=1 Tax=Ricinus communis RepID=B9SPQ6_RICCO 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.826e-12
Internal
sp_v3.0_unigene68241 SustainPine v3.0 174
AutoFact: tetratricopeptide repeat protein 2-like [Oryza sativa Japonica Group] 6.0e-11
FL-Next: sp=TPR repeat-containing thioredoxin TTL4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene68709 SustainPine v3.0 225
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR repeat 2.356e-09
Internal
sp_v3.0_unigene68718 SustainPine v3.0 224
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene69511 SustainPine v3.0 241
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene70458 SustainPine v3.0 412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR repeat 2.356e-09
Internal
sp_v3.0_unigene70894 SustainPine v3.0 425
AutoFact: TPR repeat-containing protein R13F6.10, putative n=1 Tax=Ricinus communis RepID=B9RRH8_RICCO 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain