Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene44084 SustainPine v3.0 1468
AutoFact: putative protein kinase [Arabidopsis thaliana] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene44154 SustainPine v3.0 774
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAB10514.1| unnamed protein product [Arabidopsis thaliana] gb|AED92407.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene44480 SustainPine v3.0 373
AutoFact: putative alpha-soluble NSF attachment protein [Helianthus annuus] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-soluble NSF attachment protein 1.872e-15
N-terminus
sp_v3.0_unigene45552 SustainPine v3.0 865
AutoFact: Unassigned protein
FL-Next: sp=ETO1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ethylene-overproduction protein 1 1.79e-08
Internal
sp_v3.0_unigene45744 SustainPine v3.0 174
AutoFact: Unassigned protein 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene45748 SustainPine v3.0 217
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AEE30839.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin light chain 1.679e-08
Internal
sp_v3.0_unigene46484 SustainPine v3.0 148
AutoFact: Unassigned protein 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene46542 SustainPine v3.0 246
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9T2R5_RICCO 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene46789 SustainPine v3.0 329
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Sciadopitys verticillata RepID=Q4JQ38_SCIVE 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.483e-34
Internal
sp_v3.0_unigene46988 SustainPine v3.0 2040
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR domain protein 1.069e-08
Putative Complete
sp_v3.0_unigene47323 SustainPine v3.0 231
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ45_CYCRE 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.057e-33
Internal
sp_v3.0_unigene47595 SustainPine v3.0 131
AutoFact: Binding protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7M9N9_ARALL 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene47779 SustainPine v3.0 2034
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene48318 SustainPine v3.0 482
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene48563 SustainPine v3.0 283
AutoFact: PREDICTED: similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding isoform 1 [Vitis vinifera] emb|CAN81694.1| hypothetical protein VITISV_017873 [Vitis vinifera] 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 8.953e-30
N-terminus
sp_v3.0_unigene49212 SustainPine v3.0 532
AutoFact: RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=HvSPY gb|AAC36055.1| gibberellin action negative regulator SPY [Hordeum vulgare subsp. vulgare] dbj|BAK07018.1| predicted protein [Hordeum vulga 1.0e-16
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Hordeum vulgare (Barley). 0.0
Sma3: Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 2.251e-08
N-terminus
sp_v3.0_unigene49807 SustainPine v3.0 521
AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RXE4_RICCO 4.0e-12
FL-Next: tr=Octicosapeptide/Phox/Bem1p domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
N-terminus
sp_v3.0_unigene50995 SustainPine v3.0 214
AutoFact: Peptidylprolyl isomerase, putative n=2 Tax=Ricinus communis RepID=B9T7Z2_RICCO 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl isomerase 3.623e-08
Internal
sp_v3.0_unigene51024 SustainPine v3.0 741
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Peptidyl-prolyl cis-trans isomerase PASTICCINO1 OS=Arabidopsis thaliana GN=PAS1 0.0
Internal
sp_v3.0_unigene52205 SustainPine v3.0 291
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.865e-38
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain