Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene34369 SustainPine v3.0 598
• AutoFact: transcription-coupled DNA repair protein-related; K12867 pre-mRNA-splicing factor SYF1 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene34424 SustainPine v3.0 3917
• AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
• FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene34523 SustainPine v3.0 494
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene34868 SustainPine v3.0 1570
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TPR domain protein 1.122e-08
Putative Complete
sp_v3.0_unigene35000 SustainPine v3.0 523
• AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 4.0e-23
• FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Eukaryotic translation initiation factor 3 subunit, putative 2.82e-07
Internal
sp_v3.0_unigene35019 SustainPine v3.0 2194
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|ACL13985.1| At5g21990 [Arabidopsis thaliana] gb|AED92964.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene35274 SustainPine v3.0 326
• AutoFact: Unassigned protein
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Internal
sp_v3.0_unigene35327 SustainPine v3.0 1700
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene35377 SustainPine v3.0 362
• AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 1.0e-32
• FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Eukaryotic translation initiation factor 3 subunit, putative 3.734e-07
Internal
sp_v3.0_unigene35598 SustainPine v3.0 639
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 3.0e-32
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene35701 SustainPine v3.0 1740
• AutoFact: protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] gb|AAC16088.2| expressed protein [Arabidopsis thaliana] dbj|BAC42174.1| unknown protein [Arabidopsis thaliana] gb|AAO50636.1| unknown protein [Arabidopsis thaliana] gb|AEC1 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene35745 SustainPine v3.0 643
• AutoFact: Chloroplast FLU-like protein (Fragment) n=1 Tax=Picea abies RepID=D2K2R8_PICAB 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene35779 SustainPine v3.0 752
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phlebotomus papatasi RepID=A8C9X3_PHLPP 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Ostreococcus lucimarinus (strain CCE9901). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene36065 SustainPine v3.0 551
• AutoFact: RecName: Full=Luminal-binding protein 5; Short=BiP 5; AltName: Full=78 kDa glucose-regulated protein homolog 5; Short=GRP-78-5; Flags: Precursor emb|CAA42660.1| luminal binding protein (BiP) [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene36235 SustainPine v3.0 1021
• AutoFact: tetratricopeptide repeat (TPR)-containing protein-like protein [Oryza sativa Japonica Group] 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene36372 SustainPine v3.0 725
• AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 7.0e-25
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin h 0.0
Putative Complete
sp_v3.0_unigene36449 SustainPine v3.0 783
• AutoFact: DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] ref|NP_850714.1| DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] emb|CAB68140.1| dnaJ-like protein [Arabidopsis thaliana] dbj|BAH19912.1| AT3G57340 [Arabidopsis thaliana] gb|AEE79643. 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene36910 SustainPine v3.0 2563
• AutoFact: [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl isomerase PASTICCINO1 2.643e-09
Putative C-terminus
sp_v3.0_unigene37112 SustainPine v3.0 636
• AutoFact: E3 ubiquitin-protein ligase CHIP n=2 Tax=Arabidopsis RepID=CHIP_ARATH 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene37458 SustainPine v3.0 1944
• AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RJ86_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain