Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide TPR2

Term: IPR013105  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene115016 SustainPine v3.0 383
• AutoFact: tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] dbj|BAD44219.1| unknown protein [Arabidopsis thaliana] dbj|BAD44232.1| unknown protein [Arabidopsis thaliana] gb|AED97718.1| tetratricopeptide repeat (TPR)-containing protein [Arabid 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Putative C-terminus
sp_v3.0_unigene116756 SustainPine v3.0 374
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene119809 SustainPine v3.0 352
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Entamoeba RepID=B0ET56_ENTDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative N-terminus
sp_v3.0_unigene120370 SustainPine v3.0 232
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAO14644.1|AF474176_1 pollen-specific calmodulin-binding protein [Arabidopsis thaliana] gb|ACI49798.1| At2g43040 [Arabidopsis thaliana] gb|AEC10202.1| tetratricopeptide repeat-containin 1.0e-19
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Calmodulin-binding protein MPCBP 1.317e-08
Internal
sp_v3.0_unigene121760 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123191 SustainPine v3.0 415
• AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin light chain, putative 8.239e-11
Internal
sp_v3.0_unigene127301 SustainPine v3.0 647
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene128279 SustainPine v3.0 743
• AutoFact: DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] ref|NP_850714.1| DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] emb|CAB68140.1| dnaJ-like protein [Arabidopsis thaliana] dbj|BAH19912.1| AT3G57340 [Arabidopsis thaliana] gb|AEE79643. 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene129582 SustainPine v3.0 678
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AED97054.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene129847 SustainPine v3.0 333
• AutoFact: Ankyrin repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SZ58_RICCO 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ankyrin-like protein 1.724e-10
Internal
sp_v3.0_unigene130042 SustainPine v3.0 372
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pollenless3 9.213e-12
N-terminus
sp_v3.0_unigene130511 SustainPine v3.0 342
• AutoFact: DNAJ heat shock N-terminal domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=Q9FFK2_ARATH 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene131479 SustainPine v3.0 489
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] emb|CAB45885.1| putative protein [Arabidopsis thaliana] emb|CAB79090.1| putative protein [Arabidopsis thaliana] gb|AEE84373.1| tetratricopeptide repeat-containing protein [Arabidopsis thal 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pollenless3 1.164e-11
N-terminus
sp_v3.0_unigene131712 SustainPine v3.0 581
• AutoFact: TPR repeat-containing thioredoxin TTL1 [Arabidopsis thaliana] sp|Q9MAH1.1|TTL1_ARATH RecName: Full=TPR repeat-containing thioredoxin TTL1; AltName: Full=Tetratricopeptide repeat thioredoxin-like 1 gb|AAF69536.1|AC008007_11 F12M16.20 [Arabidopsis thaliana] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene133228 SustainPine v3.0 472
• AutoFact: SET domain-containing protein C (Fragment) n=15 Tax=Pinus RepID=B0ZR10_PINTA 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain-containing protein C 1.376e-08
Putative C-terminus
sp_v3.0_unigene136459 SustainPine v3.0 272
• AutoFact: DNAJ heat shock N-terminal domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=Q9FFK2_ARATH 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene140383 SustainPine v3.0 1333
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene140877 SustainPine v3.0 554
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Misassembled
sp_v3.0_unigene141180 SustainPine v3.0 320
• AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin light chain, putative 7.536e-11
Putative C-terminus
sp_v3.0_unigene141816 SustainPine v3.0 490
• AutoFact: DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] ref|NP_850714.1| DnaJ/Hsp40 domain-containing protein [Arabidopsis thaliana] emb|CAB68140.1| dnaJ-like protein [Arabidopsis thaliana] dbj|BAH19912.1| AT3G57340 [Arabidopsis thaliana] gb|AEE79643. 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain