Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone core

Term: IPR007125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161470 SustainPine v3.0 446
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene161952 SustainPine v3.0 232
AutoFact: Histone H3 (Fragment) n=2 Tax=Vitis vinifera RepID=D7U425_VITVI 4.0e-20
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene162431 SustainPine v3.0 187
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 1.0e-13
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 1.331e-16
N-terminus
sp_v3.0_unigene162609 SustainPine v3.0 238
AutoFact: histone H4 [Arabidopsis thaliana] ref|XP_002284162.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] ref|XP_002284573.1| PREDICTED: hypothetical protein isoform 3 [Vitis vinifera] ref|XP_002262866.1| PREDICTED: hypothetical protein isoform 2 [ 1.0e-10
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 5.252e-07
C-terminus
sp_v3.0_unigene162647 SustainPine v3.0 345
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 9.0e-18
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene165487 SustainPine v3.0 221
AutoFact: Histone H2B n=9 Tax=Agaricales RepID=H2B_AGABI 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 5.04804e-41
Internal
sp_v3.0_unigene165549 SustainPine v3.0 421
AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-39
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene165759 SustainPine v3.0 468
AutoFact: Histone H2B n=9 Tax=Agaricales RepID=H2B_AGABI 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.39e-36
N-terminus
sp_v3.0_unigene165961 SustainPine v3.0 442
AutoFact: Histone H2A n=2 Tax=Agaricales RepID=B0DBI4_LACBS 2.0e-38
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene166151 SustainPine v3.0 495
AutoFact: Histone H2B n=9 Tax=Agaricales RepID=H2B_AGABI 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 3.378e-34
Putative Complete
sp_v3.0_unigene166267 SustainPine v3.0 294
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 1.0e-15
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene166327 SustainPine v3.0 535
AutoFact: PREDICTED: histone H3-like n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE1C55 9.00054e-42
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3.2 0.0
Complete
sp_v3.0_unigene166677 SustainPine v3.0 218
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 4.0e-21
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene166820 SustainPine v3.0 345
AutoFact: histone H2A [Hyacinthus orientalis] 2.0e-22
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene182668 SustainPine v3.0 289
AutoFact: Histone domain containing protein 2.0e-10
Sma3: Histone H2A 0.0
putative_coding
sp_v3.0_unigene183367 SustainPine v3.0 911
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene185804 SustainPine v3.0 772
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene186078 SustainPine v3.0 442
AutoFact: Histone H4, major n=31 Tax=Oligohymenophorea RepID=H41_TETPY 4.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 1.127e-11
Complete
sp_v3.0_unigene186142 SustainPine v3.0 560
AutoFact: Histone H4 n=1 Tax=Podospora anserina S mat+ RepID=B2B229_PODAN 1.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene186144 SustainPine v3.0 490
AutoFact: Histone H2A n=3 Tax=Eukaryota RepID=Q8GUH3_ARATH 0.0
FL-Next: sp=Histone H2A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone H2A 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain