Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone core

Term: IPR007125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene71645 SustainPine v3.0 219
AutoFact: Histone H2B n=2 Tax=Volvox carteri f. nagariensis RepID=D8TP19_VOLCA 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 6.466e-37
C-terminus
sp_v3.0_unigene72150 SustainPine v3.0 418
AutoFact: Histone H2B protein (Fragment) n=1 Tax=Pinus pinaster RepID=Q8VX93_PINPS 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 2.45227e-43
Putative N-terminus
sp_v3.0_unigene72183 SustainPine v3.0 139
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.0e-08
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 9.364e-21
Internal
sp_v3.0_unigene72739 SustainPine v3.0 160
AutoFact: Histone H2B n=1 Tax=Chlamydomonas sp. ICE-L RepID=E5G3R1_9CHLO 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 5.539e-30
C-terminus
sp_v3.0_unigene74094 SustainPine v3.0 440
AutoFact: Histone H3 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NXR9_COPC7 3.0e-23
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene74218 SustainPine v3.0 344
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=D7KSR1_ARALL 4.0e-06
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
Putative Complete
sp_v3.0_unigene74502 SustainPine v3.0 315
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=D7KSR1_ARALL 3.0e-15
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 3.84e-23
Putative N-terminus
sp_v3.0_unigene75861 SustainPine v3.0 471
AutoFact: Histone H3 n=3 Tax=Agaricales RepID=B0DIH1_LACBS 5.99756e-43
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene76198 SustainPine v3.0 369
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 3.282e-34
C-terminus
sp_v3.0_unigene76659 SustainPine v3.0 404
AutoFact: PREDICTED: histone cluster 1, H2ae-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF3ADA 3.0e-37
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene77497 SustainPine v3.0 427
AutoFact: Histone H4 n=7 Tax=Neoptera RepID=E0VXR9_PEDHC 2.0e-33
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene77779 SustainPine v3.0 359
AutoFact: Histone H3 n=3 Tax=Agaricales RepID=B0DIH1_LACBS 4.0e-36
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene78624 SustainPine v3.0 246
AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 9.0e-13
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 2.799e-09
Putative N-terminus
sp_v3.0_unigene79373 SustainPine v3.0 376
AutoFact: Histone H3 n=3 Tax=Agaricales RepID=B0DIH1_LACBS 9.0e-16
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene79581 SustainPine v3.0 192
AutoFact: Histone H3 n=1 Tax=Zea mays RepID=B6T1G0_MAIZE 3.0e-06
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 9.023e-06
C-terminus
sp_v3.0_unigene81242 SustainPine v3.0 317
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 2.0e-23
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 3.157e-09
N-terminus
sp_v3.0_unigene93984 SustainPine v3.0 837
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene94220 SustainPine v3.0 702
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-39
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2B 3.103e-33
C-terminus
sp_v3.0_unigene94788 SustainPine v3.0 928
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene94809 SustainPine v3.0 818
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.544e-20
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain