Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene32962 SustainPine v3.0 588
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33024 SustainPine v3.0 535
• AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 6.0e-30
• FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
N-terminus
sp_v3.0_unigene33106 SustainPine v3.0 959
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene33179 SustainPine v3.0 868
• AutoFact: Emb|CAB61034.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FI55_ARATH 1.0e-21
• FL-Next: tr=Centromere protein S; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Complete
sp_v3.0_unigene33367 SustainPine v3.0 905
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33656 SustainPine v3.0 758
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-25
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene33699 SustainPine v3.0 367
• AutoFact: Histone H2B n=1 Tax=Chlamydomonas sp. ICE-L RepID=E5G3R1_9CHLO 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 5.539e-30
C-terminus
sp_v3.0_unigene33711 SustainPine v3.0 896
• AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene33712 SustainPine v3.0 1415
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene33750 SustainPine v3.0 881
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-25
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene33768 SustainPine v3.0 643
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33776 SustainPine v3.0 590
• AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 4.0e-35
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene33800 SustainPine v3.0 781
• AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
• FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene33837 SustainPine v3.0 845
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 8.0e-27
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene33838 SustainPine v3.0 533
• AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
• FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene33843 SustainPine v3.0 824
• AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-34
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene33861 SustainPine v3.0 753
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-25
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene33879 SustainPine v3.0 596
• AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-34
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene33886 SustainPine v3.0 910
• AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene33905 SustainPine v3.0 977
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-24
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain