Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene128023 SustainPine v3.0 400
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene128080 SustainPine v3.0 619
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 3.785e-34
Putative Complete
sp_v3.0_unigene128204 SustainPine v3.0 495
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene128557 SustainPine v3.0 483
AutoFact: DNA binding transcription factor n=1 Tax=Brassica rapa RepID=A1YMZ3_BRACM 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit C-2 9.43e-19
Internal
sp_v3.0_unigene128706 SustainPine v3.0 863
AutoFact: Histone H2B.3 n=41 Tax=Spermatophyta RepID=H2B3_ARATH 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.463e-33
Complete
sp_v3.0_unigene128753 SustainPine v3.0 494
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TNQ7_PHYPA 9.0e-31
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus
sp_v3.0_unigene128778 SustainPine v3.0 462
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 3.0e-13
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.502e-06
C-terminus
sp_v3.0_unigene128994 SustainPine v3.0 386
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-40
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 0.0
Complete
sp_v3.0_unigene129006 SustainPine v3.0 444
AutoFact: transcription initiation factor TFIID subunit D11 [Arabidopsis thaliana] gb|AAQ65105.1| At1g02680 [Arabidopsis thaliana] gb|AAR28017.1| TAF13 [Arabidopsis thaliana] dbj|BAD43669.1| putative transcription factor TFIID [Arabidopsis thaliana] dbj|BAD43729.1| 2.0e-05
FL-Next: tr=Transcription initiation factor TFIID subunit; Jatropha curcas. 0.0
N-terminus
sp_v3.0_unigene129433 SustainPine v3.0 473
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 6.426e-34
C-terminus
sp_v3.0_unigene130216 SustainPine v3.0 640
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene130640 SustainPine v3.0 596
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 0.0
Complete
sp_v3.0_unigene130941 SustainPine v3.0 408
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit C-2 1.966e-09
C-terminus
sp_v3.0_unigene131199 SustainPine v3.0 594
AutoFact: Histone H3 n=1 Tax=Tetraodon nigroviridis RepID=Q4SKP7_TETNG 2.0e-17
FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H3 6.65e-23
Complete
sp_v3.0_unigene131374 SustainPine v3.0 527
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 8.886e-34
Putative Complete
sp_v3.0_unigene132960 SustainPine v3.0 340
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MJZ5_9ASPA 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ccaat-binding transcription factor subunit A, putative 5.172e-29
C-terminus
sp_v3.0_unigene133323 SustainPine v3.0 438
AutoFact: Histone H2B.3 n=41 Tax=Spermatophyta RepID=H2B3_ARATH 8.0e-36
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2B 6.74e-29
C-terminus
sp_v3.0_unigene133332 SustainPine v3.0 199
Sma3: Histone H2B 5.44e-26
unknown
sp_v3.0_unigene133639 SustainPine v3.0 491
AutoFact: Histone H2B n=1 Tax=Ostreococcus tauri RepID=Q013K3_OSTTA 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 3.68e-32
C-terminus
sp_v3.0_unigene135749 SustainPine v3.0 470
AutoFact: Histone H3 n=1 Tax=Oikopleura dioica RepID=E4WRZ1_OIKDI 6.0e-22
FL-Next: sp=Histone H3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H3 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain