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Assembly Name: SustainPine v2.0

Name: NusB/RsmB/TIM44

Term: IPR006027  

Source: InterPro from Sma3

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UniGenes with this annotation:

Sequence	Assembly	Length (nt)	Description E-value	Full-Length
sp_v2.0_unigene15027	SustainPine v2.0	740	• AutoFact: antitermination NusB domain-containing protein [Arabidopsis thaliana] gb|AAK96755.1| putative protein [Arabidopsis thaliana] gb|AAP42720.1| At4g26370 [Arabidopsis thaliana] gb|AEE85189.1| antitermination NusB domain-containing protein [Arabidopsis thalian 2.0e-17 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: antitermination domain-containing protein 3.08874e-41	C-terminus
sp_v2.0_unigene25933	SustainPine v2.0	1111	• AutoFact: ribosomal RNA small subunit methyltransferase B [Arabidopsis thaliana] gb|AAL60011.1| putative sun protein fmu [Arabidopsis thaliana] gb|AAM51397.1| putative sun protein fmu [Arabidopsis thaliana] dbj|BAE98415.1| putative sun (fmu) protein [Arabidopsis th 0.0 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: ribosomal rna small subunit methyltransferase b 0.0	Internal
sp_v2.0_unigene44994	SustainPine v2.0	728	• AutoFact: ribosomal RNA small subunit methyltransferase B [Arabidopsis thaliana] gb|AAL60011.1| putative sun protein fmu [Arabidopsis thaliana] gb|AAM51397.1| putative sun protein fmu [Arabidopsis thaliana] dbj|BAE98415.1| putative sun (fmu) protein [Arabidopsis th 4.0e-26 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: ribosomal rna small subunit methyltransferase b 0.0	C-terminus
sp_v2.0_unigene58311	SustainPine v2.0	236	• AutoFact: ribosomal RNA small subunit methyltransferase B [Arabidopsis thaliana] gb|AAL60011.1| putative sun protein fmu [Arabidopsis thaliana] gb|AAM51397.1| putative sun protein fmu [Arabidopsis thaliana] dbj|BAE98415.1| putative sun (fmu) protein [Arabidopsis th 2.0e-18 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: ribosomal rna small subunit methyltransferase 8.91056e-40	Internal
sp_v2.0_unigene60152	SustainPine v2.0	655	• AutoFact: antitermination NusB domain-containing protein [Arabidopsis thaliana] gb|AAK96755.1| putative protein [Arabidopsis thaliana] gb|AAP42720.1| At4g26370 [Arabidopsis thaliana] gb|AEE85189.1| antitermination NusB domain-containing protein [Arabidopsis thalian 3.0e-28 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: antitermination domain-containing protein 0.0	N-terminus
sp_v2.0_unigene71059	SustainPine v2.0	501	• AutoFact: ribosomal RNA small subunit methyltransferase B [Arabidopsis thaliana] gb|AAL60011.1| putative sun protein fmu [Arabidopsis thaliana] gb|AAM51397.1| putative sun protein fmu [Arabidopsis thaliana] dbj|BAE98415.1| putative sun (fmu) protein [Arabidopsis th 3.0e-22 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: ribosomal rna small subunit methyltransferase b 1.20946e-41	C-terminus
sp_v2.0_unigene73549	SustainPine v2.0	384	• AutoFact: Unassigned protein • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: unknown [Picea sitchensis] 7.07273e-19	N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain