Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: LDLR class B repeat

Term: IPR000033  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene12341 SustainPine v2.0 702
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL38840.1| unknown protein [Arabidopsis thaliana] gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] 4.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nhl repeat-containing protein 2-like 6.37589e-32
C-terminus
sp_v2.0_unigene20882 SustainPine v2.0 621
AutoFact: pfam08534, Redoxin, Redoxin 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nhl repeat-containing protein 2-like 0.0
Internal
sp_v2.0_unigene42693 SustainPine v2.0 286
AutoFact: Haloacid dehalogenase-like hydrolase domain-containing protein n=6 Tax=Arabidopsis RepID=Q8VZ10_ARATH 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nhl repeat-containing protein 2-like 3.80721e-38
Internal
sp_v2.0_unigene83416 SustainPine v2.0 609
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL38840.1| unknown protein [Arabidopsis thaliana] gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.19457e-25
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain