Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Pre-mRNA-processing-splicing factor 8

Term: IPR012591  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene3213 SustainPine v2.0 1388
• AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pre-mrna-processing-splicing factor 0.0
Internal
sp_v2.0_unigene6108 SustainPine v2.0 2822
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
Complete
sp_v2.0_unigene14982 SustainPine v2.0 231
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pre-mrna-processing-splicing factor 4.2039e-45
Internal
sp_v2.0_unigene25794 SustainPine v2.0 316
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: pre-mrna-processing-splicing factor 0.0
Internal
sp_v2.0_unigene37759 SustainPine v2.0 533
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: pre-mrna-processing-splicing factor 0.0
Internal
sp_v2.0_unigene42069 SustainPine v2.0 487
• AutoFact: Splicing factor-like protein n=7 Tax=Embryophyta RepID=Q9T0I6_ARATH 0.0
• FL-Next: tr=Splicing factor-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: splicing factor-like protein 0.0
Internal
sp_v2.0_unigene53456 SustainPine v2.0 175
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 7.0e-23
• FL-Next: tr=Pre-mRNA-processing-splicing factor, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: pre-mrna-processing-splicing factor 9.58076e-28
Internal
sp_v2.0_unigene55382 SustainPine v2.0 507
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein Sb10g004680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: pre-mrna-processing-splicing factor 0.0
Internal
sp_v2.0_unigene61956 SustainPine v2.0 449
• AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-processing-splicing factor 9.80909e-45
C-terminus
sp_v2.0_unigene64109 SustainPine v2.0 341
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene74413 SustainPine v2.0 366
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-processing-splicing factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain