Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, C2H2-type/integrase, DNA-binding

Term: IPR013087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2830 SustainPine v2.0 1093
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger partial 0.0
N-terminus
sp_v2.0_unigene3151 SustainPine v2.0 978
AutoFact: Nucleic acid binding protein (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBX4_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine-specific demethylase ref6-like 0.0
Putative C-terminus
sp_v2.0_unigene3245 SustainPine v2.0 1438
AutoFact: PREDICTED: zinc finger protein 546-like isoform 2 [Macaca mulatta] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene7456 SustainPine v2.0 1249
AutoFact: [R] COG5048 FOG: Zn-finger 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor iiia 0.0
Putative C-terminus
sp_v2.0_unigene7554 SustainPine v2.0 2304
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2-h2 zinc finger protein 0.0
Complete
sp_v2.0_unigene13771 SustainPine v2.0 1511
AutoFact: C2-H2 zinc finger protein [Arabidopsis thaliana] 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2-h2 zinc finger protein 1.00257e-14
Putative C-terminus
sp_v2.0_unigene17640 SustainPine v2.0 842
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger partial 0.0
N-terminus
sp_v2.0_unigene26315 SustainPine v2.0 1311
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized zinc finger protein 0.0
N-terminus
sp_v2.0_unigene37899 SustainPine v2.0 506
AutoFact: JmjC domain containing protein 7.0e-36
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: jumonji domain protein 0.0
Internal
sp_v2.0_unigene40491 SustainPine v2.0 215
AutoFact: Unassigned protein
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific demethylase ref6-like 1.45e-18
C-terminus
sp_v2.0_unigene41100 SustainPine v2.0 740
AutoFact: jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] gb|AAT77780.1| early flowering 6 [Arabidopsis thaliana] gb|AED90717.1| jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific demethylase ref6-like 0.0
Internal
sp_v2.0_unigene41528 SustainPine v2.0 561
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
FL-Next: sp=Probable lysine-specific demethylase JMJ14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable lysine-specific demethylase jmj14-like 0.0
Internal
sp_v2.0_unigene42437 SustainPine v2.0 574
AutoFact: JmjC domain containing protein 7.0e-15
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific demethylase ref6-like 0.0
Internal
sp_v2.0_unigene46737 SustainPine v2.0 379
AutoFact: Early flowering 6 n=4 Tax=Arabidopsis RepID=Q6BDA0_ARATH 4.0e-16
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific demethylase ref6-like 5.73782e-20
N-terminus
sp_v2.0_unigene48800 SustainPine v2.0 146
AutoFact: C2-H2 zinc finger protein [Arabidopsis thaliana] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.42992e-19
Internal
sp_v2.0_unigene55529 SustainPine v2.0 327
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v2.0_unigene59966 SustainPine v2.0 931
AutoFact: Jumonji domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GWH9_POPTR 0.0
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Blast2go: lysine-specific demethylase 5d 0.0
Internal
sp_v2.0_unigene63087 SustainPine v2.0 506
AutoFact: JmjC domain containing protein 1.0e-14
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: jumonji domain protein 0.0
Internal
sp_v2.0_unigene71624 SustainPine v2.0 289
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 1 2.41304e-40
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain