Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Methyl-CpG DNA binding

Term: IPR001739  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene1218 SustainPine v2.0 2093
• AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear protein x1 0.0
Putative Complete
sp_v2.0_unigene4553 SustainPine v2.0 1106
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: methyl-cpg-binding domain protein 02 0.0
Putative Complete
sp_v2.0_unigene6039 SustainPine v2.0 1620
• AutoFact: CDC6 protein (ISS) [Ostreococcus tauri] emb|CAL51521.1| CDC6 protein (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene7547 SustainPine v2.0 771
• AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyl-cpg-binding domain 10 3.65069e-35
N-terminus
sp_v2.0_unigene16061 SustainPine v2.0 847
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene17248 SustainPine v2.0 971
• AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyl binding domain protein 3.71356e-20
N-terminus
sp_v2.0_unigene25407 SustainPine v2.0 1994
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: methyl-cpg-binding domain protein 02 0.0
Complete
sp_v2.0_unigene33466 SustainPine v2.0 634
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 6.0e-30
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: methyl-cpg-binding domain protein 02 1.41321e-41
Putative N-terminus
sp_v2.0_unigene35007 SustainPine v2.0 687
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 8.65302e-42
C-terminus
sp_v2.0_unigene40779 SustainPine v2.0 412
• AutoFact: Methyl-CpG-binding domain-containing protein 9 n=2 Tax=Arabidopsis RepID=MBD9_ARATH 6.99949e-42
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene42188 SustainPine v2.0 606
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 8.0e-20
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna binding 6.74448e-22
Internal
sp_v2.0_unigene43603 SustainPine v2.0 398
• AutoFact: putative methyl-binding domain (MBD108) protein [Brachypodium sylvaticum] 1.0e-13
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: methyl binding domain protein 2.02333e-21
Internal
sp_v2.0_unigene43978 SustainPine v2.0 351
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene61425 SustainPine v2.0 1202
• AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyl-binding domain protein 0.0
C-terminus
sp_v2.0_unigene64272 SustainPine v2.0 552
• AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 5.0e-17
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: methyl-cpg-binding domain protein 02 2.03775e-24
Putative C-terminus
sp_v2.0_unigene80623 SustainPine v2.0 412
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene88221 SustainPine v2.0 787
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJS0_RICCO 1.4013e-45
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: methyl-cpg-binding domain protein 02 1.4013e-45
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain