Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type

Term: IPR003617  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1003 SustainPine v2.0 2076
AutoFact: protein trichome birefringence-like 24 [Arabidopsis thaliana] gb|AAN13062.1| unknown protein [Arabidopsis thaliana] gb|AEE84806.1| protein trichome birefringence-like 24 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1212 SustainPine v2.0 1020
AutoFact: BAH and TFIIS domain-containing protein n=4 Tax=Arabidopsis RepID=F4JCS8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and tfiis domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene3109 SustainPine v2.0 1920
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and tfiis domain-containing protein 0.0
Putative Complete
sp_v2.0_unigene6400 SustainPine v2.0 560
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 8.0e-32
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: bah and tfiis domain-containing protein 1.40887e-41
Internal
sp_v2.0_unigene6663 SustainPine v2.0 1517
AutoFact: protein trichome birefringence-like 25 [Arabidopsis thaliana] gb|AAO42299.1| unknown protein [Arabidopsis thaliana] gb|AAO64043.1| unknown protein [Arabidopsis thaliana] gb|AEE27285.1| protein trichome birefringence-like 25 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8092 SustainPine v2.0 1023
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene15261 SustainPine v2.0 855
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 1.44089e-22
N-terminus
sp_v2.0_unigene21300 SustainPine v2.0 714
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana] gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene33938 SustainPine v2.0 898
AutoFact: Med26 domain containing protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bah and tfiis domain-containing protein 2.06132e-32
Internal
sp_v2.0_unigene44533 SustainPine v2.0 456
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and tfiis domain-containing protein 1.11523e-35
C-terminus
sp_v2.0_unigene53548 SustainPine v2.0 331
AutoFact: Protein trichome birefringence-like 18 n=2 Tax=Arabidopsis RepID=Q8VYS5_ARATH 9.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trichome birefringence-like 18 0.0
Internal
sp_v2.0_unigene62523 SustainPine v2.0 699
AutoFact: Transcription elongation factor s-II, putative n=1 Tax=Ricinus communis RepID=B9SRT6_RICCO 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 0.0
N-terminus
sp_v2.0_unigene77736 SustainPine v2.0 466
AutoFact: putative elongation factor [Arabidopsis thaliana] 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 2.86401e-30
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain