Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Histone deacetylase interacting

Term: IPR013194  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene327 SustainPine v2.0 2220
AutoFact: Os01g0109700 protein (Fragment) n=6 Tax=Oryza sativa RepID=Q0JRB9_ORYSJ 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 0.0
C-terminus
sp_v2.0_unigene2665 SustainPine v2.0 1170
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Putative Complete
sp_v2.0_unigene6927 SustainPine v2.0 1017
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Putative Complete
sp_v2.0_unigene23946 SustainPine v2.0 401
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 8.0e-11
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 3.90018e-12
Putative N-terminus
sp_v2.0_unigene24017 SustainPine v2.0 641
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase sin3 component 4.90987e-39
Putative Complete
sp_v2.0_unigene24104 SustainPine v2.0 865
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase sin3 component 0.0
Complete
sp_v2.0_unigene24141 SustainPine v2.0 1084
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sin3 histone deacetylase complex 3.22299e-44
Putative Complete
sp_v2.0_unigene24149 SustainPine v2.0 330
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 1.0e-09
FL-Next: sp=Paired amphipathic helix protein Sin3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase sin3 component 3.71016e-11
Putative N-terminus
sp_v2.0_unigene27256 SustainPine v2.0 756
AutoFact: Paired amphipathic helix repeat-containing protein / transcription regulator-related n=1 Tax=Musa acuminata RepID=Q1EPA1_MUSAC 2.0e-20
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 2.36777e-22
C-terminus
sp_v2.0_unigene27458 SustainPine v2.0 1207
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
sp_v2.0_unigene28141 SustainPine v2.0 1308
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-08
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
sp_v2.0_unigene28426 SustainPine v2.0 3517
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
C-terminus
sp_v2.0_unigene28536 SustainPine v2.0 399
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sin3 histone deacetylase complex 4.2039e-45
C-terminus
sp_v2.0_unigene34708 SustainPine v2.0 500
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 5.0e-12
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 5.59615e-29
Internal
sp_v2.0_unigene39061 SustainPine v2.0 635
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 2.0e-14
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 6.56335e-22
N-terminus
sp_v2.0_unigene42966 SustainPine v2.0 506
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3 0.0
Internal
sp_v2.0_unigene66178 SustainPine v2.0 315
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 9.0e-27
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase sin3 component 1.20971e-38
Internal
sp_v2.0_unigene81490 SustainPine v2.0 619
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene82352 SustainPine v2.0 345
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 7.0e-18
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 2 7.39851e-22
Internal
sp_v2.0_unigene84884 SustainPine v2.0 662
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain