Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ku70/Ku80, N-terminal alpha/beta

Term: IPR005161  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene263 SustainPine v2.0 1697
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
C-terminus
sp_v2.0_unigene11014 SustainPine v2.0 893
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
N-terminus
sp_v2.0_unigene25939 SustainPine v2.0 590
AutoFact: Ku P80 DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RDD3_RICCO 1.0e-34
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku80-like 0.0
Internal
sp_v2.0_unigene30499 SustainPine v2.0 435
AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 7.0e-31
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ku80-like protein 0.0
Internal
sp_v2.0_unigene32304 SustainPine v2.0 933
AutoFact: ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana] sp|Q9FQ09.1|KU80_ARATH RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subun 1.0e-30
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku80-like 0.0
C-terminus
sp_v2.0_unigene37121 SustainPine v2.0 652
AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 0.0
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku80-like 0.0
Internal
sp_v2.0_unigene44781 SustainPine v2.0 250
AutoFact: EST1082199 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWADI16 3' end, mRNA sequence. 8.0e-38
Putative coding
sp_v2.0_unigene66596 SustainPine v2.0 278
AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 2.0e-09
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ku80-like protein 1.25503e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain