Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: ARID/BRIGHT DNA-binding domain

Term: IPR001606  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1092 SustainPine v2.0 991
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
C-terminus
sp_v2.0_unigene1966 SustainPine v2.0 2978
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
FL-Next: tr=ARID/BRIGHT DNA-binding domain-containing protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 7.00649e-45
C-terminus
sp_v2.0_unigene3037 SustainPine v2.0 969
AutoFact: HMG_box domain containing protein 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
sp_v2.0_unigene3111 SustainPine v2.0 1869
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
sp_v2.0_unigene4253 SustainPine v2.0 1526
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v2.0_unigene4384 SustainPine v2.0 1093
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L9D8_ARALL 9.99995e-41
FL-Next: tr=ARID/BRIGHT DNA-binding domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: arid bright dna-binding domain-containing protein 1.68156e-44
Internal
sp_v2.0_unigene4458 SustainPine v2.0 1891
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v2.0_unigene6006 SustainPine v2.0 1275
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b protein 15-like 0.0
Putative Complete
sp_v2.0_unigene7655 SustainPine v2.0 2205
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
sp_v2.0_unigene10659 SustainPine v2.0 739
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v2.0_unigene12237 SustainPine v2.0 825
AutoFact: ELM2; AT-rich interaction region; Homeodomain-related n=1 Tax=Medicago truncatula RepID=Q2HUC6_MEDTR 4.0e-27
FL-Next: tr=ELM2; AT-rich interaction region; Homeodomain-related; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna binding 7.26063e-27
Putative C-terminus
sp_v2.0_unigene13706 SustainPine v2.0 511
AutoFact: ARID domain containing protein 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
sp_v2.0_unigene14788 SustainPine v2.0 594
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.77404e-42
N-terminus
sp_v2.0_unigene21209 SustainPine v2.0 1163
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v2.0_unigene25966 SustainPine v2.0 1647
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein 0.0
C-terminus
sp_v2.0_unigene26454 SustainPine v2.0 939
AutoFact: glutathione S-transferase GST 16 - like protein [Oryza sativa Japonica Group] gb|EAZ09947.1| hypothetical protein OsI_32246 [Oryza sativa Indica Group] gb|EAZ45544.1| hypothetical protein OsJ_30204 [Oryza sativa Japonica Group] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.4013e-45
N-terminus
sp_v2.0_unigene28880 SustainPine v2.0 1564
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
Internal
sp_v2.0_unigene37899 SustainPine v2.0 506
AutoFact: JmjC domain containing protein 7.0e-36
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: jumonji domain protein 0.0
Internal
sp_v2.0_unigene41528 SustainPine v2.0 561
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
FL-Next: sp=Probable lysine-specific demethylase JMJ14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable lysine-specific demethylase jmj14-like 0.0
Internal
sp_v2.0_unigene47122 SustainPine v2.0 401
AutoFact: Jumonji domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GWH9_POPTR 7.00649e-44
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Blast2go: lysine-specific demethylase 5d 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain