Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Uncharacterised protein family UPF0016

Term: IPR001727  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5358 SustainPine v2.0 916
AutoFact: transmembrane protein, putative [Arabidopsis thaliana] 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v2.0_unigene6871 SustainPine v2.0 1548
AutoFact: Transmembrane protein TPARL, putative n=1 Tax=Ricinus communis RepID=B9RWP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene13659 SustainPine v2.0 1256
AutoFact: Nop14 multi-domain protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-rrna-processing protein esf1-like 0.0
Putative Complete
sp_v2.0_unigene13735 SustainPine v2.0 1626
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
sp_v2.0_unigene23157 SustainPine v2.0 758
AutoFact: Predicted membrane protein n=4 Tax=Malpighiales RepID=B9HWL1_POPTR 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
sp_v2.0_unigene27009 SustainPine v2.0 1611
AutoFact: [S] COG2119 Predicted membrane protein 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
sp_v2.0_unigene27546 SustainPine v2.0 2293
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Complete
sp_v2.0_unigene63629 SustainPine v2.0 578
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 3.48228e-27
C-terminus
sp_v2.0_unigene71844 SustainPine v2.0 276
AutoFact: PPR domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.28463e-27
Internal
sp_v2.0_unigene75643 SustainPine v2.0 317
AutoFact: [S] COG2119 Predicted membrane protein 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 4.88757e-33
Internal
sp_v2.0_unigene81536 SustainPine v2.0 866
AutoFact: UPF0016 domain containing protein 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.09266e-37
N-terminus
sp_v2.0_unigene84253 SustainPine v2.0 949
AutoFact: GDT1-like protein 1, chloroplastic n=2 Tax=Arabidopsis RepID=GDT11_ARATH 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.3771e-35
C-terminus
sp_v2.0_unigene85757 SustainPine v2.0 392
AutoFact: transmembrane protein, putative [Arabidopsis thaliana] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Internal
sp_v2.0_unigene85951 SustainPine v2.0 888
AutoFact: Predicted membrane protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GMI0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain