Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene13736 SustainPine v2.0 1036
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-30
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: ubiquitin 7.82079e-30
Putative N-terminus
sp_v2.0_unigene14951 SustainPine v2.0 992
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin fusion protein 0.0
Complete
sp_v2.0_unigene15338 SustainPine v2.0 1639
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexaubiquitin protein 0.0
Putative Complete
sp_v2.0_unigene15406 SustainPine v2.0 1307
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: polyubiquitin 10 0.0
Complete
sp_v2.0_unigene15430 SustainPine v2.0 1060
• AutoFact: [O] COG5272 Ubiquitin 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Complete
sp_v2.0_unigene15587 SustainPine v2.0 1203
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: polyubiquitin 3 0.0
Complete
sp_v2.0_unigene15768 SustainPine v2.0 2020
• AutoFact: Polyubiquitin 8 n=1 Tax=Arabidopsis thaliana RepID=UBQ8_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 3 0.0
Complete
sp_v2.0_unigene16065 SustainPine v2.0 1424
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 0.0
Complete
sp_v2.0_unigene16871 SustainPine v2.0 1547
• AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexaubiquitin protein 0.0
Putative Complete
sp_v2.0_unigene17214 SustainPine v2.0 1225
• AutoFact: Ubiquitin family protein n=3 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
sp_v2.0_unigene17528 SustainPine v2.0 1120
• AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
sp_v2.0_unigene17975 SustainPine v2.0 725
• AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene18078 SustainPine v2.0 503
• AutoFact: [O] COG5272 Ubiquitin 7.0e-36
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
• Blast2go: ubiquitin 0.0
Complete
sp_v2.0_unigene18510 SustainPine v2.0 340
• AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 9.0e-31
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
• Blast2go: ubiquitin 6.56803e-34
Complete
sp_v2.0_unigene19264 SustainPine v2.0 150
• AutoFact: polyubiquitin [Triticum aestivum] 1.0e-19
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 5.00755e-27
Putative N-terminus
sp_v2.0_unigene19641 SustainPine v2.0 522
• AutoFact: polyubiquitin [Pinus sylvestris] 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Blast2go: multidrug resistance protein abc transporter family 0.0
Putative Complete
sp_v2.0_unigene19849 SustainPine v2.0 999
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Complete
sp_v2.0_unigene19921 SustainPine v2.0 1491
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: polyubiquitin 10 0.0
Complete
sp_v2.0_unigene20872 SustainPine v2.0 1231
• AutoFact: polyubiquitin [Volvox carteri f. nagariensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 3 0.0
C-terminus
sp_v2.0_unigene22189 SustainPine v2.0 1218
• AutoFact: polyubiquitin [Pinus sylvestris] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain