Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene74647 SustainPine v2.0 139
AutoFact: Ubiquitin n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CCU3_9EUKA 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cnpv096 ubiquitin 8.84226e-19
Internal
sp_v2.0_unigene74746 SustainPine v2.0 255
AutoFact: Ubiquitin n=1 Tax=Metarhizium acridum CQMa 102 RepID=E9DYE5_METAQ 3.0e-39
FL-Next: tr=Putative uncharacterized protein Sb06g029360; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v2.0_unigene76880 SustainPine v2.0 618
AutoFact: NEDD8-like protein RUB1 [Arabidopsis thaliana] sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=NEDD8-like protein RUB1; AltName: Full=Ubiquitin-related protein 1; Short=AtR 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 2 0.0
Complete
sp_v2.0_unigene79523 SustainPine v2.0 800
AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 3.02921e-31
Complete
sp_v2.0_unigene80219 SustainPine v2.0 366
AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 5.0e-16
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: multidrug resistance protein abc transporter family 6.89821e-20
Complete
sp_v2.0_unigene80361 SustainPine v2.0 383
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 9 8.75533e-30
C-terminus
sp_v2.0_unigene83815 SustainPine v2.0 492
AutoFact: [O] COG5272 Ubiquitin 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiqutin 1 5.76062e-29
Putative Complete
sp_v2.0_unigene83817 SustainPine v2.0 396
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-38
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 13 5.89484e-39
Putative N-terminus
sp_v2.0_unigene83819 SustainPine v2.0 547
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v2.0_unigene83820 SustainPine v2.0 391
AutoFact: [O] COG5272 Ubiquitin 3.0e-16
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 2.83548e-20
C-terminus
sp_v2.0_unigene83821 SustainPine v2.0 196
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-22
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v2.0_unigene83822 SustainPine v2.0 355
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 4.04456e-35
N-terminus
sp_v2.0_unigene83823 SustainPine v2.0 654
AutoFact: Ubiquitin-60S ribosomal protein L40 n=1 Tax=Trypanosoma cruzi RepID=RL402_TRYCR 9.0e-36
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Putative Complete
sp_v2.0_unigene83904 SustainPine v2.0 592
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 5.0e-40
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin-like protein 0.0
Putative Complete
sp_v2.0_unigene83907 SustainPine v2.0 475
AutoFact: [O] COG5272 Ubiquitin 6.0e-36
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v2.0_unigene83908 SustainPine v2.0 388
AutoFact: Putative ubiquitin C variant 2 n=1 Tax=Taeniopygia guttata RepID=B5G2P2_TAEGU 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v2.0_unigene83909 SustainPine v2.0 292
AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 1.43628e-35
N-terminus
sp_v2.0_unigene83910 SustainPine v2.0 510
AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 6.0e-37
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: 60s ribosomal protein l40 0.0
Complete
sp_v2.0_unigene83911 SustainPine v2.0 213
AutoFact: polyubiquitin [Triticum aestivum] 2.0e-21
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 6.23005e-29
N-terminus
sp_v2.0_unigene83914 SustainPine v2.0 525
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain