Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein S27a

Term: IPR002906  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene61444 SustainPine v2.0 840
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 3 0.0
Putative Complete
sp_v2.0_unigene61531 SustainPine v2.0 782
AutoFact: ubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v2.0_unigene62374 SustainPine v2.0 666
AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 2.0e-11
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: multidrug resistance protein abc transporter family 3.39677e-11
Putative Complete
sp_v2.0_unigene62466 SustainPine v2.0 722
AutoFact: ubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Hexameric polyubiquitin 6PU11; Capsicum annuum (Bell pepper). 0.0
Blast2go: polyubiquitin 0.0
Complete
sp_v2.0_unigene62951 SustainPine v2.0 722
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Putative N-terminus
sp_v2.0_unigene63272 SustainPine v2.0 557
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 5.0e-31
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: multidrug resistance protein abc transporter family 4.92342e-31
Putative Complete
sp_v2.0_unigene63408 SustainPine v2.0 470
AutoFact: polyubiquitin [Capsicum chinense] 3.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v2.0_unigene63461 SustainPine v2.0 340
AutoFact: ubiquitin precursor [Hevea brasiliensis] 4.2039e-45
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin-like protein 0.0
Putative Complete
sp_v2.0_unigene63543 SustainPine v2.0 1107
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v2.0_unigene64904 SustainPine v2.0 321
AutoFact: Ubiquitin [Medicago truncatula] 7.0e-23
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 5.17992e-23
Putative N-terminus
sp_v2.0_unigene65332 SustainPine v2.0 246
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 3.0e-28
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitin 2.04313e-30
Putative N-terminus
sp_v2.0_unigene66713 SustainPine v2.0 210
AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 2.84718e-18
N-terminus
sp_v2.0_unigene67096 SustainPine v2.0 263
AutoFact: ubiquitin [Arabidopsis thaliana] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 1.99863e-29
Putative N-terminus
sp_v2.0_unigene67144 SustainPine v2.0 382
AutoFact: Ubiquitin n=1 Tax=Coccidioides posadasii str. Silveira RepID=E9DIZ1_COCPS 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v2.0_unigene67256 SustainPine v2.0 286
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 8.0e-33
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: polyubiquitin-like protein 1.28639e-42
Complete
sp_v2.0_unigene67346 SustainPine v2.0 443
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin-related 1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=Ubiquitin-related 2; Contains: RecName: Full=Ubiquitin-related 3; Flags: Precursor gb|AAA72126.1| polyubiquitin [Aglaotham 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.73235e-22
Putative N-terminus
sp_v2.0_unigene68854 SustainPine v2.0 407
AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 1.54938e-11
Putative C-terminus
sp_v2.0_unigene70384 SustainPine v2.0 501
AutoFact: Ubiquitin [Medicago truncatula] 3.0e-39
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin-like protein 0.0
Putative Complete
sp_v2.0_unigene71979 SustainPine v2.0 387
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 4.0e-20
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: ubiquitin 1.50703e-25
Complete
sp_v2.0_unigene74436 SustainPine v2.0 256
AutoFact: PREDICTED: ubiquitin A-52 residue ribosomal protein fusion product 1 n=1 Tax=Rattus norvegicus RepID=UPI0001CF4A0F 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 2.11893e-13
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain