Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site

Term: IPR013000  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene17616 SustainPine v2.0 1668
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l4-1 0.0
Complete
sp_v2.0_unigene23132 SustainPine v2.0 1816
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l4-1 0.0
Complete
sp_v2.0_unigene25041 SustainPine v2.0 1275
• AutoFact: ENT domain containing protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna binding protein 1.90027e-13
Putative Complete
sp_v2.0_unigene26211 SustainPine v2.0 1532
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l4-1 0.0
Complete
sp_v2.0_unigene26558 SustainPine v2.0 470
• AutoFact: tudor-like RNA-binding protein [Arabidopsis thaliana] emb|CAA22571.1| putative protein [Arabidopsis thaliana] emb|CAB79961.1| putative protein [Arabidopsis thaliana] gb|AAO23651.1| At4g32440 [Arabidopsis thaliana] dbj|BAE99365.1| hypothetical protein [Ara 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.5897e-25
C-terminus
sp_v2.0_unigene31014 SustainPine v2.0 1290
• AutoFact: ENT domain containing protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna binding protein 1.96821e-13
Putative Complete
sp_v2.0_unigene31405 SustainPine v2.0 1721
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l4-1 0.0
Complete
sp_v2.0_unigene35927 SustainPine v2.0 727
• AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna binding protein 7.34968e-22
C-terminus
sp_v2.0_unigene67937 SustainPine v2.0 455
• AutoFact: ENT domain containing protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna binding protein 1.01183e-11
C-terminus
sp_v2.0_unigene81031 SustainPine v2.0 231
• AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l4-1 1.54804e-17
Internal
sp_v2.0_unigene81799 SustainPine v2.0 484
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain