Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like

Term: IPR014719  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1577 SustainPine v2.0 1808
AutoFact: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] emb|CAB38305.1| ribosomal-like protein [Arabidopsis thaliana] emb|CAB80431.1| ribosomal-like protein [Arabidopsis thaliana] gb|AAL67122.1| AT4g37660/F19F18_150 [Arabi 7.0e-32
FL-Next: sp=50S ribosomal protein L12, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
Blast2go: 50s ribosomal protein l7 l12-like 1.4013e-45
Complete
sp_v2.0_unigene2232 SustainPine v2.0 947
AutoFact: ATP-dependent Clp protease adaptor protein ClpS n=2 Tax=Arabidopsis RepID=Q9SX29_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease adaptor protein 0.0
Complete
sp_v2.0_unigene8072 SustainPine v2.0 1440
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9RB19_RICCO 8.0e-35
FL-Next: sp=50S ribosomal protein L12, chloroplastic; Spinacia oleracea (Spinach). 0.0
Blast2go: ribosomal protein l12 atp-dependent clp protease adaptor protein 1.33824e-42
Complete
sp_v2.0_unigene8441 SustainPine v2.0 1233
AutoFact: ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] ref|NP_001185360.1| ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] gb|AAK25833.1|AF360123_1 unknown protein [Arabidopsis thaliana] gb|AAB61098.1| Similar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l7 l12 domain-containing protein 0.0
Complete
sp_v2.0_unigene8659 SustainPine v2.0 770
AutoFact: ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-3-3Ab] gb|ABD00627.1| ATP-dependent Clp protease adaptor protein ClpS [Synechococcus sp. JA-3-3Ab] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease adaptor protein 0.0
C-terminus
sp_v2.0_unigene23678 SustainPine v2.0 1141
AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 1.4013e-45
Complete
sp_v2.0_unigene27942 SustainPine v2.0 847
AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 6.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 1.4013e-45
C-terminus
sp_v2.0_unigene28139 SustainPine v2.0 1259
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9S691_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l7 8.88775e-40
Complete
sp_v2.0_unigene28280 SustainPine v2.0 811
AutoFact: ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] ref|NP_001185360.1| ribosomal protein L7/L12 domain-containing protein [Arabidopsis thaliana] gb|AAK25833.1|AF360123_1 unknown protein [Arabidopsis thaliana] gb|AAB61098.1| Similar 4.0e-12
FL-Next: sp=50S ribosomal protein L12, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
Blast2go: protein 1.02261e-19
C-terminus
sp_v2.0_unigene31922 SustainPine v2.0 1111
AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 2.8026e-45
Complete
sp_v2.0_unigene68160 SustainPine v2.0 504
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Nicotiana RepID=RK12_NICSY 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l12-a 2.26253e-22
C-terminus
sp_v2.0_unigene91511 SustainPine v2.0 710
AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l12-a 2.99723e-30
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain