Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Bacterial Ig-like, group 2

Term: IPR003343  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2650 SustainPine v2.0 2067
AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Putative Complete
sp_v2.0_unigene15871 SustainPine v2.0 1632
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Complete
sp_v2.0_unigene16829 SustainPine v2.0 1680
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S651_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene16859 SustainPine v2.0 909
AutoFact: putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclearribonucleoprotein a2 0.0
Putative C-terminus
sp_v2.0_unigene22297 SustainPine v2.0 1535
AutoFact: putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene22862 SustainPine v2.0 377
AutoFact: GRP multi-domain protein 2.0e-08
Coding
sp_v2.0_unigene40308 SustainPine v2.0 606
AutoFact: EMB3012 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MJ71_ARALL 9.80909e-45
FL-Next: tr=EMB3012; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: nuclear pore membrane glycoprotein 210-like 0.0
Internal
sp_v2.0_unigene58520 SustainPine v2.0 297
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear pore membrane glycoprotein 210-like 9.19013e-36
Internal
sp_v2.0_unigene61896 SustainPine v2.0 602
AutoFact: Drf_FH1 multi-domain protein 9.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.73592e-11
Internal
sp_v2.0_unigene80416 SustainPine v2.0 297
AutoFact: GRP multi-domain protein 6.0e-09
Coding
sp_v2.0_unigene85360 SustainPine v2.0 890
AutoFact: RecName: Full=Histidine-rich glycoprotein; Flags: Precursor emb|CAA25698.1| histidine-rich protein [Plasmodium lophurae] prf||1101401A protein,His rich 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical repeat protein 2.17804e-27
C-terminus
sp_v2.0_unigene92297 SustainPine v2.0 787
AutoFact: Heterogeneous nuclear ribonucleoprotein A3 n=4 Tax=Andropogoneae RepID=B6TGB9_MAIZE 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain