Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosome biogenesis protein BMS1/TSR1, C-terminal

Term: IPR007034  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene600 SustainPine v2.0 1068
AutoFact: [J] COG5192 GTP-binding protein required for 40S ribosome biogenesis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ribosome biogenesis protein bms1 homolog 0.0
Internal
sp_v2.0_unigene1846 SustainPine v2.0 1147
AutoFact: BMS1 and NUC121 domain-containing protein [Arabidopsis thaliana] gb|AEE28028.1| BMS1 and NUC121 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ribosome biogenesis protein bms1-like protein 0.0
Internal
sp_v2.0_unigene2017 SustainPine v2.0 1012
AutoFact: [R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
sp_v2.0_unigene2040 SustainPine v2.0 1517
AutoFact: DUF663 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-rrna-processing protein tsr1 homolog 0.0
C-terminus
sp_v2.0_unigene3822 SustainPine v2.0 932
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_122.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7UD95_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-rrna-processing protein tsr1 homolog 0.0
C-terminus
sp_v2.0_unigene11096 SustainPine v2.0 941
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-rrna-processing protein tsr1 homolog 3.51479e-16
N-terminus
sp_v2.0_unigene14891 SustainPine v2.0 832
AutoFact: Ribosome biogenesis protein bms1, putative n=1 Tax=Ricinus communis RepID=B9RU90_RICCO 1.00053e-42
FL-Next: tr=Ribosome biogenesis protein bms1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ribosome biogenesis protein bms1-like protein 0.0
Internal
sp_v2.0_unigene75000 SustainPine v2.0 326
AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 7.0e-21
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s8-like 5.06435e-26
Internal
sp_v2.0_unigene85430 SustainPine v2.0 880
AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 0.0
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s8 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain