Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Paraneoplastic encephalomyelitis antigen

Term: IPR002343  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2513 SustainPine v2.0 2759
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly binding cytoplasmic 1 0.0
Complete
sp_v2.0_unigene2582 SustainPine v2.0 1102
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RNK5_RICCO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 28 kda chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene2650 SustainPine v2.0 2067
AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Putative Complete
sp_v2.0_unigene4432 SustainPine v2.0 1260
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 2.21199e-12
C-terminus
sp_v2.0_unigene4876 SustainPine v2.0 1637
AutoFact: nucleic acid binding protein1 [Zea mays] gb|AAA33486.1| nucleic acid-binding protein [Zea mays] gb|ACG38158.1| ribonucleoprotein [Zea mays] gb|ACL52389.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 31 kda chloroplastic-like 0.0
Complete
sp_v2.0_unigene6058 SustainPine v2.0 1388
AutoFact: FCA gamma [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding abscisic acid binding protein 0.0
Putative Complete
sp_v2.0_unigene6408 SustainPine v2.0 2083
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v2.0_unigene8371 SustainPine v2.0 1953
AutoFact: Flowering time control protein FCA, putative n=1 Tax=Ricinus communis RepID=B9RZT3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein 0.0
Putative Complete
sp_v2.0_unigene11000 SustainPine v2.0 880
AutoFact: FCA gamma [Pisum sativum] 1.0e-17
FL-Next: Isoform Beta of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein fca-like 1.49858e-21
N-terminus
sp_v2.0_unigene14886 SustainPine v2.0 2532
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Complete
sp_v2.0_unigene15871 SustainPine v2.0 1632
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Complete
sp_v2.0_unigene16605 SustainPine v2.0 1487
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
N-terminus
sp_v2.0_unigene16829 SustainPine v2.0 1680
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S651_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene16859 SustainPine v2.0 909
AutoFact: putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclearribonucleoprotein a2 0.0
Putative C-terminus
sp_v2.0_unigene17893 SustainPine v2.0 532
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene19652 SustainPine v2.0 2752
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Complete
sp_v2.0_unigene21484 SustainPine v2.0 674
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.46524e-34
C-terminus
sp_v2.0_unigene21620 SustainPine v2.0 1105
AutoFact: poly(A)-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyadenylate-binding protein 2-like 0.0
Putative Complete
sp_v2.0_unigene22297 SustainPine v2.0 1535
AutoFact: putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene22765 SustainPine v2.0 657
AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine-rich rna-binding 3.90236e-26
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain