Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein L33, conserved site

Term: IPR018264  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene17229 SustainPine v2.0 937
AutoFact: 50S ribosomal protein L33 n=2 Tax=Picea sitchensis RepID=A9NLY6_PICSI 7.0e-24
FL-Next: sp=50S ribosomal protein L33; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l33 5.71806e-30
Complete
sp_v2.0_unigene30995 SustainPine v2.0 317
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon gag protein 1.39486e-29
Putative N-terminus
sp_v2.0_unigene46139 SustainPine v2.0 547
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100777486 2.94034e-41
Internal
sp_v2.0_unigene53005 SustainPine v2.0 527
AutoFact: RVT_1 domain containing protein 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100259900 0.0
Putative Complete
sp_v2.0_unigene62182 SustainPine v2.0 662
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCB7_POPTR 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854171 2.05991e-43
Internal
sp_v2.0_unigene67862 SustainPine v2.0 283
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854191 2.09151e-18
Putative C-terminus
sp_v2.0_unigene69011 SustainPine v2.0 469
AutoFact: NXRV091_F10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV091_F10 5' similar to Arabidopsis thaliana sequence At1g37060 Athila retroelment ORF 1, putative see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100855032 5.88545e-44
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain