Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Thiamine biosynthesis protein ThiC

Term: IPR002817  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6818 SustainPine v2.0 2291
AutoFact: Catalytic, putative n=2 Tax=Malpighiales RepID=B9SHY3_RICCO 0.0
FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
Blast2go: thiamine biosynthesis protein 0.0
Complete
sp_v2.0_unigene13944 SustainPine v2.0 2639
AutoFact: Catalytic, putative n=2 Tax=Malpighiales RepID=B9SHY3_RICCO 0.0
FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
Blast2go: thiamine biosynthesis protein 0.0
Complete
sp_v2.0_unigene25968 SustainPine v2.0 1653
AutoFact: thiamine biosynthesis protein ThiC [Arabidopsis thaliana] ref|NP_850135.1| thiamine biosynthesis protein ThiC [Arabidopsis thaliana] ref|NP_001189634.1| thiamine biosynthesis protein ThiC [Arabidopsis thaliana] gb|AAC35232.1| putative thiamin biosynthesis 0.0
FL-Next: tr=mRNA, clone: RTFL01-17-G05; Thellungiella halophila (Salt cress). 0.0
Blast2go: thiamine biosynthesis protein 0.0
N-terminus
sp_v2.0_unigene26119 SustainPine v2.0 1117
AutoFact: putative thiamin biosynthesis protein [Oryza sativa Japonica Group] 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamine biosynthesis protein 8.30318e-33
Putative Complete
sp_v2.0_unigene28807 SustainPine v2.0 1093
AutoFact: putative thiamin biosynthesis protein [Oryza sativa Japonica Group] 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamine biosynthesis protein 7.03004e-33
Putative Complete
sp_v2.0_unigene30771 SustainPine v2.0 451
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Internal
sp_v2.0_unigene52695 SustainPine v2.0 298
AutoFact: GQ02818.B7_C13 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA clone GQ02818_C13 5', mRNA sequence. 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.21549e-39
Putative C-terminus
sp_v2.0_unigene55329 SustainPine v2.0 266
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.04375e-27
Internal
sp_v2.0_unigene56693 SustainPine v2.0 470
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene61805 SustainPine v2.0 1892
AutoFact: putative thiamine biosythesis protein ThiC [Poa secunda] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: thiamine biosynthesis protein 0.0
Complete
sp_v2.0_unigene62790 SustainPine v2.0 264
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 3.85357e-43
C-terminus
sp_v2.0_unigene63165 SustainPine v2.0 406
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene65164 SustainPine v2.0 523
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
sp_v2.0_unigene67971 SustainPine v2.0 446
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.66547e-34
C-terminus
sp_v2.0_unigene69708 SustainPine v2.0 188
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 3.25446e-31
Internal
sp_v2.0_unigene69713 SustainPine v2.0 179
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 4.63725e-17
Internal
sp_v2.0_unigene69854 SustainPine v2.0 469
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.05951e-36
C-terminus
sp_v2.0_unigene74480 SustainPine v2.0 324
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v2.0_unigene75794 SustainPine v2.0 301
AutoFact: WS01019.B21_H16 SS-R-N-A-11 Picea sitchensis cDNA clone WS01019_H16 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 1.5612e-38
C-terminus
sp_v2.0_unigene78520 SustainPine v2.0 568
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at2g15690-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain