Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribosomal protein 60S

Term: IPR001813  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1215 SustainPine v2.0 3119
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene14124 SustainPine v2.0 1494
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 8.0e-11
FL-Next: sp=60S acidic ribosomal protein P3-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 60s acidic ribosomal protein p3 2.61989e-27
Complete
sp_v2.0_unigene15403 SustainPine v2.0 819
AutoFact: 60s acidic ribosomal protein [Prunus dulcis] gb|ABH03379.1| 60S acidic ribosomal protein [Prunus dulcis] 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 6.30928e-20
Complete
sp_v2.0_unigene16309 SustainPine v2.0 1558
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v2.0_unigene16350 SustainPine v2.0 914
AutoFact: 60S acidic ribosomal protein P1 [Zea mays] gb|AAB71079.1| acidic ribosomal protein P1a [Zea mays] gb|ACG31544.1| 60S acidic ribosomal protein P1 [Zea mays] gb|ACR38189.1| unknown [Zea mays] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 8.6505e-30
Complete
sp_v2.0_unigene21066 SustainPine v2.0 1037
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 1.95579e-29
Complete
sp_v2.0_unigene21434 SustainPine v2.0 1614
AutoFact: 60S acidic ribosomal protein P0-1 n=2 Tax=Arabidopsis RepID=RLA01_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v2.0_unigene22278 SustainPine v2.0 695
AutoFact: 60S acidic ribosomal protein P0 n=6 Tax=Andropogoneae RepID=RLA0_MAIZE 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 1.97783e-22
C-terminus
sp_v2.0_unigene22796 SustainPine v2.0 1489
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v2.0_unigene24788 SustainPine v2.0 467
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.93233e-26
N-terminus
sp_v2.0_unigene25641 SustainPine v2.0 1603
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v2.0_unigene26995 SustainPine v2.0 1044
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p3 1.32677e-21
Complete
sp_v2.0_unigene28101 SustainPine v2.0 819
AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 5.95133e-30
Complete
sp_v2.0_unigene39152 SustainPine v2.0 775
AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 3.98882e-30
Complete
sp_v2.0_unigene41612 SustainPine v2.0 744
AutoFact: Ribosomal_60s domain containing protein 4.0e-21
unknown
sp_v2.0_unigene44692 SustainPine v2.0 463
AutoFact: Sodium transporter n=1 Tax=Selaginella moellendorffii RepID=D8S0R1_SELML 1.0e-27
FL-Next: sp=Probable cation transporter HKT6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: sodium transporter 2.25063e-31
Putative C-terminus
sp_v2.0_unigene53318 SustainPine v2.0 230
AutoFact: 60s Acidic ribosomal protein n=2 Tax=leotiomyceta RepID=E3QDB1_COLGM 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p2 2.69979e-21
N-terminus
sp_v2.0_unigene58033 SustainPine v2.0 551
AutoFact: 60S acidic ribosomal protein P0 n=1 Tax=Postia placenta Mad-698-R RepID=B8NZ89_POSPM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
N-terminus
sp_v2.0_unigene60307 SustainPine v2.0 1507
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v2.0_unigene61122 SustainPine v2.0 597
AutoFact: 60S acidic ribosomal protein P1, putative n=1 Tax=Ricinus communis RepID=B9RNK0_RICCO 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 6.16901e-16
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain