Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: YTH domain

Term: IPR007275  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene507 SustainPine v2.0 1972
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: yt521-b-like protein 0.0
Complete
sp_v2.0_unigene596 SustainPine v2.0 1854
AutoFact: cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis thaliana] sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor CPSF30; AltName: Full=Zinc finger CCCH domain-containing protein 11; Short=AtC3H11 gb|ABX260 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cleavage and polyadenylation specificity factor cpsf30 0.0
Putative N-terminus
sp_v2.0_unigene3936 SustainPine v2.0 1083
AutoFact: DNA methyltransferase [Nicotiana tabacum] 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna (cytosine-5)-methyltransferase drm2 0.0
Internal
sp_v2.0_unigene5131 SustainPine v2.0 3162
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene6560 SustainPine v2.0 2118
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Putative C-terminus
sp_v2.0_unigene9510 SustainPine v2.0 1957
AutoFact: pfam04146, YTH, YT521-B-like domain 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
N-terminus
sp_v2.0_unigene10840 SustainPine v2.0 2881
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene13179 SustainPine v2.0 763
AutoFact: Domains rearranged methyltransferase n=3 Tax=Nicotiana RepID=B1GYI2_NICSY 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: domains rearranged methyltransferase 0.0
Putative C-terminus
sp_v2.0_unigene16390 SustainPine v2.0 2783
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Complete
sp_v2.0_unigene16668 SustainPine v2.0 1447
AutoFact: Similar to YT521-B-like family domain containing protein (Fragment) n=1 Tax=Triticum aestivum RepID=D8L9K6_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
C-terminus
sp_v2.0_unigene19927 SustainPine v2.0 1307
AutoFact: pfam04146, YTH, YT521-B-like domain 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
C-terminus
sp_v2.0_unigene27077 SustainPine v2.0 1986
AutoFact: pfam04146, YTH, YT521-B-like domain 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain-containing 0.0
C-terminus
sp_v2.0_unigene27700 SustainPine v2.0 1644
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: yt521-b-like protein 0.0
Complete
sp_v2.0_unigene28057 SustainPine v2.0 573
AutoFact: YTH domain containing protein 2.0e-20
FL-Next: sp=Cleavage and polyadenylation specificity factor CPSF30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene30838 SustainPine v2.0 378
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 9.99995e-41
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna methyltransferase 0.0
Internal
sp_v2.0_unigene66287 SustainPine v2.0 397
AutoFact: pfam04146, YTH, YT521-B-like domain 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.24593e-43
Internal
sp_v2.0_unigene68014 SustainPine v2.0 409
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 6.02558e-44
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: domains rearranged methyltransferase 0.0
C-terminus
sp_v2.0_unigene78350 SustainPine v2.0 314
AutoFact: Os03g0748000 protein n=3 Tax=Oryza sativa RepID=Q10CW7_ORYSJ 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yt521-b-like family expressed 4.80273e-11
Internal
sp_v2.0_unigene91774 SustainPine v2.0 637
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100791190 1.88153e-18
Putative Complete
sp_v2.0_unigene91776 SustainPine v2.0 680
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MKG2_9ASPA 3.0e-39
FL-Next: Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 0.0
Blast2go: c-x8-c-x5-c-x3-h type zn-finger 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain