Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ribulose bisphosphate carboxylase, large subunit, C-terminal

Term: IPR000685  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene1534 SustainPine v2.0 1769
• AutoFact: Tim17 domain containing protein 9.0e-07
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
sp_v2.0_unigene3275 SustainPine v2.0 2128
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
• FL-Next: sp=MATE efflux family protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: mate efflux family protein dtx1-like 0.0
Complete
sp_v2.0_unigene9598 SustainPine v2.0 1110
• AutoFact: Putative copine I (Fragment) n=1 Tax=Picea abies RepID=B2KZG6_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
N-terminus
sp_v2.0_unigene11804 SustainPine v2.0 1471
• AutoFact: pfam07002, Copine, Copine 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
Putative N-terminus
sp_v2.0_unigene14516 SustainPine v2.0 687
• AutoFact: Diadenosine tetraphosphate hydrolase n=1 Tax=Hyacinthus orientalis RepID=Q5YJN3_HYAOR 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bis(5 -adenosyl)-triphosphatase-like 0.0
C-terminus
sp_v2.0_unigene22681 SustainPine v2.0 1033
• AutoFact: diadenosine tetraphosphate hydrolase [Hyacinthus orientalis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bis(5 -adenosyl)-triphosphatase-like 0.0
Complete
sp_v2.0_unigene36020 SustainPine v2.0 824
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ripening regulated protein 0.0
C-terminus
sp_v2.0_unigene37148 SustainPine v2.0 733
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transparent testa 12 0.0
N-terminus
sp_v2.0_unigene42070 SustainPine v2.0 406
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mate efflux family protein dtx1-like 0.0
Internal
sp_v2.0_unigene45083 SustainPine v2.0 358
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transparent testa 12 0.0
Internal
sp_v2.0_unigene55308 SustainPine v2.0 443
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bis(5 -adenosyl)-triphosphatase 3.25208e-17
Putative N-terminus
sp_v2.0_unigene57335 SustainPine v2.0 401
• AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mate efflux family protein dtx1-like 0.0
Internal
sp_v2.0_unigene62669 SustainPine v2.0 744
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mate efflux family protein dtx1-like 0.0
C-terminus
sp_v2.0_unigene65236 SustainPine v2.0 413
• AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ripening regulated protein 3.59937e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain