|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene55902
|
SustainPine v2.0
|
539
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
3.0e-40
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene56280
|
SustainPine v2.0
|
246
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-28
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
1.43514e-35
|
|
Internal
|
|
sp_v2.0_unigene56919
|
SustainPine v2.0
|
446
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
2.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
4.42849e-39
|
|
Internal
|
|
sp_v2.0_unigene59381
|
SustainPine v2.0
|
636
|
|
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia sub-class
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene59509
|
SustainPine v2.0
|
790
|
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene59563
|
SustainPine v2.0
|
598
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera]
|
0.0
|
|
Putative C-terminus
|
|
sp_v2.0_unigene59652
|
SustainPine v2.0
|
822
|
|
• AutoFact: rve domain containing protein
|
4.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
3.36647e-28
|
|
Putative N-terminus
|
|
sp_v2.0_unigene60008
|
SustainPine v2.0
|
546
|
|
• AutoFact: rve domain containing protein
|
1.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
1.98564e-42
|
|
Internal
|
|
sp_v2.0_unigene60052
|
SustainPine v2.0
|
383
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
2.0e-35
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
2.04982e-41
|
|
Internal
|
|
sp_v2.0_unigene60061
|
SustainPine v2.0
|
472
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene63886
|
SustainPine v2.0
|
725
|
|
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene64657
|
SustainPine v2.0
|
500
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene65131
|
SustainPine v2.0
|
288
|
|
• AutoFact: RVT_2 domain containing protein
|
4.0e-26
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_028342 [Vitis vinifera]
|
1.91795e-25
|
|
Internal
|
|
sp_v2.0_unigene66558
|
SustainPine v2.0
|
369
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
4.0e-30
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
8.94806e-30
|
|
Internal
|
|
sp_v2.0_unigene66756
|
SustainPine v2.0
|
350
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
2.0e-20
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
5.69106e-27
|
|
Internal
|
|
sp_v2.0_unigene68182
|
SustainPine v2.0
|
381
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
4.18805e-33
|
|
Internal
|
|
sp_v2.0_unigene70753
|
SustainPine v2.0
|
311
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
2.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
1.93998e-20
|
|
Internal
|
|
sp_v2.0_unigene70943
|
SustainPine v2.0
|
298
|
|
• AutoFact: rve domain containing protein
|
3.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
3.98257e-27
|
|
Internal
|
|
sp_v2.0_unigene73737
|
SustainPine v2.0
|
427
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
1.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94
|
9.85097e-19
|
|
Internal
|
|
sp_v2.0_unigene74085
|
SustainPine v2.0
|
358
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-24
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
2.00223e-28
|
|
Internal
|
