|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene34751
|
SustainPine v2.0
|
552
|
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ
|
9.00054e-42
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
2.94273e-44
|
|
Internal
|
|
sp_v2.0_unigene37073
|
SustainPine v2.0
|
671
|
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene37195
|
SustainPine v2.0
|
609
|
|
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene38649
|
SustainPine v2.0
|
549
|
|
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR
|
0.0
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Blast2go: gag pol polyprotein
|
0.0
|
|
Putative N-terminus
|
|
sp_v2.0_unigene38675
|
SustainPine v2.0
|
573
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene39577
|
SustainPine v2.0
|
382
|
|
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN
|
5.0e-22
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
8.83454e-27
|
|
C-terminus
|
|
sp_v2.0_unigene40191
|
SustainPine v2.0
|
500
|
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene41200
|
SustainPine v2.0
|
499
|
|
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH
|
3.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
9.80909e-45
|
|
Internal
|
|
sp_v2.0_unigene42712
|
SustainPine v2.0
|
484
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
1.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
4.2039e-45
|
|
Internal
|
|
sp_v2.0_unigene44726
|
SustainPine v2.0
|
499
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
4.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
8.61108e-37
|
|
Internal
|
|
sp_v2.0_unigene45597
|
SustainPine v2.0
|
679
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
2.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
1.47575e-36
|
|
Internal
|
|
sp_v2.0_unigene46215
|
SustainPine v2.0
|
541
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH
|
2.8026e-45
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene47024
|
SustainPine v2.0
|
461
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=16 Tax=Oryza RepID=Q2R0G5_ORYSJ
|
3.0e-36
|
|
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
5.73411e-42
|
|
Internal
|
|
sp_v2.0_unigene48040
|
SustainPine v2.0
|
421
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB
|
8.0e-35
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
4.2039e-45
|
|
Internal
|
|
sp_v2.0_unigene48572
|
SustainPine v2.0
|
493
|
|
• AutoFact: Polyprotein-like, related n=1 Tax=Asparagus officinalis RepID=Q2AA73_ASPOF
|
1.0e-25
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
2.61698e-25
|
|
Internal
|
|
sp_v2.0_unigene51875
|
SustainPine v2.0
|
507
|
|
• AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA
|
1.0e-36
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Blast2go: reverse transcriptase
|
5.48468e-42
|
|
Putative Complete
|
|
sp_v2.0_unigene52994
|
SustainPine v2.0
|
269
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
5.0e-22
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
5.46198e-26
|
|
Internal
|
|
sp_v2.0_unigene54849
|
SustainPine v2.0
|
320
|
|
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC
|
3.0e-16
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
5.99731e-16
|
|
Internal
|
|
sp_v2.0_unigene54915
|
SustainPine v2.0
|
228
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE
|
6.0e-23
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
3.67401e-30
|
|
Internal
|
|
sp_v2.0_unigene55110
|
SustainPine v2.0
|
415
|
|
• AutoFact: rve domain containing protein
|
2.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_010605 [Vitis vinifera]
|
0.0
|
|
Internal
|
