Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Protein of unknown function DUF789

Term: IPR008507  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene62182 SustainPine v2.0 662
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCB7_POPTR 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100854171 2.05991e-43
Internal
sp_v2.0_unigene63886 SustainPine v2.0 725
AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene65776 SustainPine v2.0 897
AutoFact: DUF789 domain containing protein 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100244012 6.96035e-25
Putative Complete
sp_v2.0_unigene75721 SustainPine v2.0 320
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100852619 9.79722e-22
C-terminus
sp_v2.0_unigene79911 SustainPine v2.0 631
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
sp_v2.0_unigene81865 SustainPine v2.0 866
AutoFact: DUF789 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
sp_v2.0_unigene85635 SustainPine v2.0 854
AutoFact: photosystem II stability/assembly factor HCF136 [Arabidopsis thaliana] sp|O82660.1|P2SAF_ARATH RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic; Flags: Precursor emb|CAA75723.1| HCF136 protein [Arabidopsis thaliana] dbj|BAB0982 0.0
FL-Next: sp=Photosystem II stability/assembly factor HCF136, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: photosystem ii stability assembly factor hcf136 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain