Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA topoisomerase I, active site

Term: IPR018521  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4902 SustainPine v2.0 2201
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
sp_v2.0_unigene27110 SustainPine v2.0 1994
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase i 0.0
C-terminus
sp_v2.0_unigene38985 SustainPine v2.0 436
AutoFact: transcription factor jumonji, jmjC domain-containing protein [Dictyostelium discoideum AX4] gb|EAL72353.1| transcription factor jumonji, jmjC domain-containing protein [Dictyostelium discoideum AX4] 8.0e-38
FL-Next: sp=F-box protein At1g78280; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at1g78280-like 0.0
Internal
sp_v2.0_unigene41894 SustainPine v2.0 399
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q67XX3.1|FB252_ARATH RecName: Full=F-box protein At5g06550 dbj|BAD43165.1| putative protein [Arabidopsis thaliana] dbj|BAD44458.1| putative protein [Arabidopsis thaliana] gb|AED91033.1| uncharacterized pro 2.0e-08
FL-Next: sp=F-box protein At1g78280; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at1g78280-like 2.26507e-39
N-terminus
sp_v2.0_unigene54442 SustainPine v2.0 359
AutoFact: Unassigned protein
FL-Next: sp=F-box protein At1g78280; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at1g78280-like 2.06282e-40
Internal
sp_v2.0_unigene61565 SustainPine v2.0 668
AutoFact: RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I gb|AAB41401.1| topoisomerase I [Daucus carota] 1.0e-39
FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
Blast2go: dna topoisomerase i 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain