Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: NLI interacting factor

Term: IPR004274  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5 SustainPine v2.0 3439
AutoFact: NIF domain containing protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein 170F8.6; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene1623 SustainPine v2.0 2378
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3664 SustainPine v2.0 864
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 2.0e-07
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 3-like 0.0
C-terminus
sp_v2.0_unigene4120 SustainPine v2.0 1163
AutoFact: Zinc ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RR35_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: senescence-associated-like protein 0.0
C-terminus
sp_v2.0_unigene4600 SustainPine v2.0 1208
AutoFact: Unassigned protein
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
N-terminus
sp_v2.0_unigene4868 SustainPine v2.0 1336
AutoFact: Carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase n=1 Tax=Cucumis melo subsp. melo RepID=E5GC25_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nli interacting factor family protein 0.0
Putative C-terminus
sp_v2.0_unigene6228 SustainPine v2.0 2317
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Complete
sp_v2.0_unigene6935 SustainPine v2.0 1861
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] emb|CAB87850.1| putative protein [Arabidopsis thaliana] gb|AAM20657.1| putative protein [Arabidopsis thaliana] gb|AAM61626.1| unknown [Arabidopsis thaliana] gb|AAN15623. 0.0
FL-Next: tr=CTD small phosphatase-like protein; Zea mays (Maize). 0.0
Blast2go: ctd small phosphatase-like protein 0.0
Complete
sp_v2.0_unigene9336 SustainPine v2.0 1219
AutoFact: Zinc ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RR35_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene9691 SustainPine v2.0 1883
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
C-terminus
sp_v2.0_unigene14028 SustainPine v2.0 969
AutoFact: Ubiquitin-like domain-containing CTD phosphatase (Fragment) n=1 Tax=Solanum nigrum RepID=F4YBD0_SOLNI 2.0e-17
FL-Next: sp=Ubiquitin-like domain-containing CTD phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like domain-containing ctd phosphatase 3.67241e-20
N-terminus
sp_v2.0_unigene16730 SustainPine v2.0 689
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v2.0_unigene20480 SustainPine v2.0 2139
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 4-like 0.0
Complete
sp_v2.0_unigene21973 SustainPine v2.0 1980
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scp1-like small phosphatase 5 0.0
Complete
sp_v2.0_unigene22513 SustainPine v2.0 2016
AutoFact: mitochondrial import inner membrane translocase subunit TIM50 [Arabidopsis thaliana] sp|Q8VYE2.1|TIM50_ARATH RecName: Full=Mitochondrial import inner membrane translocase subunit TIM50; AltName: Full=Protein EMBRYO DEFECTIVE 1860; Flags: Precursor gb|AAL5 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mitochondrial import inner membrane translocase subunit tim50-like 0.0
Complete
sp_v2.0_unigene24838 SustainPine v2.0 1369
AutoFact: ubiquitin-like domain-containing CTD phosphatase [Arabidopsis thaliana] sp|Q8W3M6.1|UBCP_ARATH RecName: Full=Ubiquitin-like domain-containing CTD phosphatase dbj|BAB83612.1| unknown protein [Arabidopsis thaliana] gb|AEE82552.1| ubiquitin-like domain-conta 0.0
FL-Next: sp=Ubiquitin-like domain-containing CTD phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like domain-containing ctd phosphatase 0.0
Putative Complete
sp_v2.0_unigene27529 SustainPine v2.0 379
AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ 5.0e-14
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 2.26966e-17
Internal
sp_v2.0_unigene27574 SustainPine v2.0 2121
AutoFact: translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] gb|ABF59254.1| unknown protein [Arabidopsis thaliana] gb|AED92716.1| translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: translation initiation factor eif-2b subunit gamma-like 0.0
Complete
sp_v2.0_unigene28291 SustainPine v2.0 1840
AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Putative C-terminus
sp_v2.0_unigene31198 SustainPine v2.0 1205
AutoFact: ubiquitin-like domain-containing CTD phosphatase [Arabidopsis thaliana] sp|Q8W3M6.1|UBCP_ARATH RecName: Full=Ubiquitin-like domain-containing CTD phosphatase dbj|BAB83612.1| unknown protein [Arabidopsis thaliana] gb|AEE82552.1| ubiquitin-like domain-conta 0.0
FL-Next: sp=Ubiquitin-like domain-containing CTD phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like domain-containing ctd phosphatase 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain