Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, MYND-type

Term: IPR002893  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene37013 SustainPine v2.0 641
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: mynd finger family protein 0.0
Internal
sp_v2.0_unigene41942 SustainPine v2.0 455
AutoFact: Os06g0654000 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0DAG6_ORYSJ 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 19-like 0.0
Internal
sp_v2.0_unigene43040 SustainPine v2.0 570
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mynd finger family protein 1.09301e-43
C-terminus
sp_v2.0_unigene44179 SustainPine v2.0 157
AutoFact: ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana] sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName: Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName: Full=Ubiquitin thiolesterase 17; AltName: Ful 3.0e-15
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 17-like 1.93268e-20
Internal
sp_v2.0_unigene55456 SustainPine v2.0 376
AutoFact: ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana] sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName: Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName: Full=Ubiquitin thiolesterase 16; AltName: Ful 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 6.30848e-18
Internal
sp_v2.0_unigene56896 SustainPine v2.0 347
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 2.05193e-31
Internal
sp_v2.0_unigene57194 SustainPine v2.0 282
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase ashr1-like 4.19774e-29
Putative N-terminus
sp_v2.0_unigene63195 SustainPine v2.0 294
AutoFact: ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana] sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName: Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName: Full=Ubiquitin thiolesterase 18; AltName: Ful 8.0e-25
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 17-like 9.27656e-30
Internal
sp_v2.0_unigene64489 SustainPine v2.0 517
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene76332 SustainPine v2.0 200
AutoFact: Cysteine-type endopeptidase, putative n=1 Tax=Ricinus communis RepID=B9RNQ1_RICCO 4.0e-20
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 19-like 4.35602e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain