Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Zinc finger, HIT-type

Term: IPR007529  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene1065 SustainPine v2.0 967
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_156.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7TNX1_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hit-type zinc finger family protein 0.0
N-terminus
sp_v2.0_unigene8855 SustainPine v2.0 1036
• AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 7.0e-13
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 41; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase 0.0
N-terminus
sp_v2.0_unigene9072 SustainPine v2.0 897
• AutoFact: zf-UBP domain containing protein 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dead-box atp-dependent rna helicase 0.0
C-terminus
sp_v2.0_unigene10667 SustainPine v2.0 3478
• AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v2.0_unigene11262 SustainPine v2.0 846
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAU94374.1| At1g56440 [Arabidopsis thaliana] gb|AAX12885.1| At1g56440 [Arabidopsis thaliana] dbj|BAE99447.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33395.1| tetratrico 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase ii-associated protein 3-like 0.0
Putative N-terminus
sp_v2.0_unigene11608 SustainPine v2.0 912
• AutoFact: HIT-type zinc finger protein [Arabidopsis thaliana] dbj|BAD44383.1| unnamed protein product [Arabidopsis thaliana] gb|ABE77402.1| At4g28820 [Arabidopsis thaliana] gb|AEE85550.1| HIT-type zinc finger protein [Arabidopsis thaliana] 8.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene20778 SustainPine v2.0 1051
• AutoFact: HIT zinc finger family protein n=5 Tax=Andropogoneae RepID=B6TE25_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein Sb01g031320; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: zinc finger hit domain-containing protein 2-like 0.0
Putative C-terminus
sp_v2.0_unigene25977 SustainPine v2.0 929
• AutoFact: zinc finger protein [Nicotiana benthamiana] 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger hit domain-containing protein 1 0.0
Complete
sp_v2.0_unigene29915 SustainPine v2.0 632
• AutoFact: pfam04438, zf-HIT, HIT zinc finger 8.0e-11
• FL-Next: tr=Putative uncharacterized protein OSJNBb0018B10.17; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: zinc finger hit domain-containing protein 2-like 1.32342e-20
Putative N-terminus
sp_v2.0_unigene35325 SustainPine v2.0 796
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RRH5_RICCO 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger hit domain-containing protein 1 2.8026e-45
C-terminus
sp_v2.0_unigene42650 SustainPine v2.0 372
• AutoFact: DEAD-box ATP-dependent RNA helicase 41 n=4 Tax=Oryza sativa RepID=RH41_ORYSJ 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 41 4.2039e-45
Internal
sp_v2.0_unigene43518 SustainPine v2.0 452
• AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene48270 SustainPine v2.0 375
• AutoFact: DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana] ref|NP_001030621.1| DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana] sp|Q3EBD3.1|RH41_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 41 gb|AEE73756.1| DEAD-box ATP-depende 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 41 0.0
Internal
sp_v2.0_unigene50008 SustainPine v2.0 258
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RYR9_RICCO 4.0e-16
• FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: zinc finger hit domain-containing protein 2-like 2.67332e-19
Internal
sp_v2.0_unigene62710 SustainPine v2.0 771
• AutoFact: zinc finger protein [Nicotiana benthamiana] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger hit domain-containing protein 1 8.55523e-32
N-terminus
sp_v2.0_unigene63904 SustainPine v2.0 693
• AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.77034e-34
C-terminus
sp_v2.0_unigene80133 SustainPine v2.0 608
• AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene85189 SustainPine v2.0 1326
• AutoFact: zinc finger protein [Nicotiana benthamiana] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger hit domain-containing protein 1 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain