Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Ionotropic glutamate receptor

Term: IPR001320  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2146 SustainPine v2.0 2062
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Putative Complete
sp_v2.0_unigene5931 SustainPine v2.0 616
AutoFact: Glutamate receptor n=2 Tax=Selaginella moellendorffii RepID=D8QYE9_SELML 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate receptor 7.77986e-27
N-terminus
sp_v2.0_unigene6452 SustainPine v2.0 584
AutoFact: Glutamate receptor n=1 Tax=Ricinus communis RepID=B9R8R0_RICCO 3.0e-35
FL-Next: sp=Glutamate receptor 3.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 2.31242e-41
Internal
sp_v2.0_unigene7342 SustainPine v2.0 418
AutoFact: Glutamate receptor n=1 Tax=Sorghum bicolor RepID=C5X740_SORBI 7.0e-12
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate receptor -like 1.22615e-14
Putative N-terminus
sp_v2.0_unigene7355 SustainPine v2.0 2789
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
N-terminus
sp_v2.0_unigene11679 SustainPine v2.0 1513
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative Complete
sp_v2.0_unigene11749 SustainPine v2.0 595
AutoFact: Glutamate receptor n=2 Tax=Selaginella moellendorffii RepID=D8QYE9_SELML 2.0e-26
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 1.77502e-29
C-terminus
sp_v2.0_unigene12631 SustainPine v2.0 474
AutoFact: RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated ion channel 2.5; Flags: Precursor 9.0e-11
FL-Next: sp=Glutamate receptor 2.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor -like 1.05297e-13
Internal
sp_v2.0_unigene13976 SustainPine v2.0 1637
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9IAE8_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Putative N-terminus
sp_v2.0_unigene14158 SustainPine v2.0 573
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9H685_POPTR 1.0e-39
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 5.60519e-45
Internal
sp_v2.0_unigene14186 SustainPine v2.0 486
AutoFact: putative glutamate receptor ion channel [Arabidopsis thaliana] 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor -like 0.0
Internal
sp_v2.0_unigene14757 SustainPine v2.0 1025
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9HPN5_POPTR 0.0
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate receptor 0.0
Internal
sp_v2.0_unigene18766 SustainPine v2.0 581
AutoFact: NXRV075_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV075_D04 5' similar to Arabidopsis thaliana sequence At1g37110 see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_011062 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene20169 SustainPine v2.0 435
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene24697 SustainPine v2.0 882
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene24701 SustainPine v2.0 597
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 9.94922e-44
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
sp_v2.0_unigene25914 SustainPine v2.0 815
AutoFact: Glutamate-gated kainate-type ion channel receptor subunit GluR5 n=1 Tax=Populus trichocarpa RepID=B9HBH9_POPTR 2.0e-26
FL-Next: sp=Glutamate receptor 2.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 1.23378e-30
C-terminus
sp_v2.0_unigene29637 SustainPine v2.0 690
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 0.0
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 0.0
Internal
sp_v2.0_unigene31998 SustainPine v2.0 691
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
sp_v2.0_unigene32015 SustainPine v2.0 589
AutoFact: glutamate receptor [Malus hupehensis] 1.0e-29
FL-Next: sp=Glutamate receptor 3.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 4.82173e-41
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain