Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Ionotropic glutamate receptor

Term: IPR001320  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene43463 SustainPine v2.0 589
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
sp_v2.0_unigene43624 SustainPine v2.0 494
AutoFact: Glutamate receptor n=1 Tax=Sorghum bicolor RepID=C5XD09_SORBI 3.0e-26
FL-Next: sp=Glutamate receptor 2.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 7.01468e-26
Internal
sp_v2.0_unigene44874 SustainPine v2.0 357
AutoFact: Glutamate receptor n=2 Tax=Oryza sativa RepID=Q69L11_ORYSJ 9.0e-24
FL-Next: sp=Glutamate receptor 2.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 5.90808e-29
Internal
sp_v2.0_unigene45462 SustainPine v2.0 524
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 4.0e-37
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia-type polyprotein 3.54949e-42
Putative C-terminus
sp_v2.0_unigene46427 SustainPine v2.0 517
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 5.0e-12
FL-Next: sp=Glutamate receptor 3.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 4.10952e-13
N-terminus
sp_v2.0_unigene46873 SustainPine v2.0 202
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-19
FL-Next: sp=Glutamate receptor 3.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 1.13057e-23
Internal
sp_v2.0_unigene48687 SustainPine v2.0 316
AutoFact: Glutamate receptor 3.2 n=2 Tax=Arabidopsis RepID=GLR32_ARATH 1.0e-23
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 2.30244e-23
Internal
sp_v2.0_unigene50040 SustainPine v2.0 364
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 3.0e-35
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 6.9056e-42
Internal
sp_v2.0_unigene51391 SustainPine v2.0 325
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 2.0e-33
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate receptor 5.51218e-39
Internal
sp_v2.0_unigene54915 SustainPine v2.0 228
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 3.67401e-30
Internal
sp_v2.0_unigene55110 SustainPine v2.0 415
AutoFact: rve domain containing protein 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_010605 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene56919 SustainPine v2.0 446
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 4.42849e-39
Internal
sp_v2.0_unigene57678 SustainPine v2.0 312
AutoFact: RecName: Full=Glutamate receptor 3.1; AltName: Full=Ligand-gated ion channel 3.1; Flags: Precursor emb|CAE03759.1| OSJNBa0013K16.8 [Oryza sativa Japonica Group] gb|ABC33859.1| putative glutamate receptor-like channel 3.1 [Oryza sativa Japonica Group] gb|E 5.0e-20
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate receptor -like 8.32211e-23
Internal
sp_v2.0_unigene59381 SustainPine v2.0 636
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia sub-class 0.0
Internal
sp_v2.0_unigene59509 SustainPine v2.0 790
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 0.0
Internal
sp_v2.0_unigene59563 SustainPine v2.0 598
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera] 0.0
Putative C-terminus
sp_v2.0_unigene59938 SustainPine v2.0 327
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9IAE8_POPTR 3.0e-17
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 8.98226e-18
Internal
sp_v2.0_unigene60052 SustainPine v2.0 383
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 2.04982e-41
Internal
sp_v2.0_unigene60061 SustainPine v2.0 472
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene63234 SustainPine v2.0 358
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 2.0e-09
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 5.28406e-11
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain