Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: ATP-dependent helicase, C-terminal

Term: IPR006555  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5552 SustainPine v2.0 607
AutoFact: regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti] gb|EAT38683.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti] 4.0e-28
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene6338 SustainPine v2.0 665
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T079_PHYPA 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase uvh6 0.0
Putative N-terminus
sp_v2.0_unigene6869 SustainPine v2.0 2268
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene10118 SustainPine v2.0 763
AutoFact: nucleotide excision repair protein XP-D homolog [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase uvh6 0.0
C-terminus
sp_v2.0_unigene12656 SustainPine v2.0 625
AutoFact: Regulator of telomere elongation helicase 1 n=2 Tax=Andropogoneae RepID=B6UDG6_MAIZE 0.0
FL-Next: tr=Regulator of telomere elongation helicase 1; Zea mays (Maize). 0.0
Blast2go: regulator of telomere elongation helicase 1 0.0
Internal
sp_v2.0_unigene25585 SustainPine v2.0 1929
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] ref|NP_194863.4| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] dbj|BAC43211.1| unknown protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: core-2 i-branching beta- -n-acetylglucosaminyltransferase family protein 0.0
Complete
sp_v2.0_unigene27219 SustainPine v2.0 737
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] emb|CAB87691.1| putative protein [Arabidopsis thaliana] gb|AAM13183.1| putative protein [Arabidopsis thaliana] gb|AAP68292.1| At5g11730 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: core-2 i-branching beta- -n-acetylglucosaminyltransferase family protein 0.0
N-terminus
sp_v2.0_unigene35847 SustainPine v2.0 600
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|ABF59157.1| hypothetical protein At1g51770 [Arabidopsis thaliana] gb|AEE32713.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: core-2 i-branching beta- -n-acetylglucosaminyltransferase family protein 0.0
C-terminus
sp_v2.0_unigene37789 SustainPine v2.0 608
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 5.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: regulator of telomere elongation helicase 1 8.40779e-45
Putative C-terminus
sp_v2.0_unigene41399 SustainPine v2.0 374
AutoFact: DNA repair helicase rad3/xp-d [Aedes aegypti] gb|EAT48594.1| DNA repair helicase rad3/xp-d [Aedes aegypti] 7.0e-32
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene46872 SustainPine v2.0 341
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 2.0e-24
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: regulator of telomere elongation helicase 1 6.31012e-37
Internal
sp_v2.0_unigene48429 SustainPine v2.0 344
AutoFact: Strong similarity to gb|U04968 nucleotide excision repair protein (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase uvh6 0.0
Internal
sp_v2.0_unigene48655 SustainPine v2.0 457
AutoFact: PREDICTED: similar to helicase [Strongylocentrotus purpuratus] 4.0e-25
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: atp-dependent rna helicase chl1 0.0
Internal
sp_v2.0_unigene56002 SustainPine v2.0 241
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|AAD32878.1|AC005489_16 F14N23.16 [Arabidopsis thaliana] gb|ABK32109.1| At1g10280 [Arabidopsis thaliana] gb|AEE28561.1| Core-2/I-branching beta-1,6-N-acety 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: core-2 i-branching beta- -n-acetylglucosaminyltransferase family protein 2.16054e-40
Internal
sp_v2.0_unigene80070 SustainPine v2.0 1094
AutoFact: Dihydrolipoyl dehydrogenase n=2 Tax=Picea sitchensis RepID=B8LLJ4_PICSI 0.0
FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoyl dehydrogenase 1 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain