Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: 3'-5' exonuclease domain

Term: IPR002562  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6341 SustainPine v2.0 1394
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable exonuclease mut-7 homolog 0.0
Putative Complete
sp_v2.0_unigene6884 SustainPine v2.0 766
AutoFact: Exosome complex exonuclease RRP6 n=3 Tax=Arabidopsis RepID=A9LLI7_ARATH 3.0e-26
FL-Next: tr=Putative nucleolar protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: exosome component 10-like 4.42875e-29
N-terminus
sp_v2.0_unigene9420 SustainPine v2.0 1274
AutoFact: DNA polymerase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna polymerase 0.0
C-terminus
sp_v2.0_unigene9641 SustainPine v2.0 3088
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrp6-like protein 1 0.0
Putative Complete
sp_v2.0_unigene9947 SustainPine v2.0 1384
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
Complete
sp_v2.0_unigene12268 SustainPine v2.0 543
AutoFact: 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21257.1| At5g24340 [Arabidopsis thaliana] dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana] gb|AED93295.1| 3' 2.0e-21
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: at5g24340 3.89507e-26
Internal
sp_v2.0_unigene13765 SustainPine v2.0 1403
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
Complete
sp_v2.0_unigene23691 SustainPine v2.0 1685
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
Complete
sp_v2.0_unigene25392 SustainPine v2.0 1875
AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
Complete
sp_v2.0_unigene29537 SustainPine v2.0 355
AutoFact: 3'-5' exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SDW9_RICCO 5.0e-40
FL-Next: tr=Putative uncharacterized protein At2g32420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rrp6-like protein 3 0.0
Internal
sp_v2.0_unigene31296 SustainPine v2.0 557
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rrp6-like protein 3 0.0
Internal
sp_v2.0_unigene38290 SustainPine v2.0 430
AutoFact: 3'-5' exonuclease-related protein n=1 Tax=Arabidopsis thaliana RepID=F4JTU8_ARATH 9.0e-07
FL-Next: sp=Werner Syndrome-like exonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: werner syndrome-like exonuclease 8.71139e-08
C-terminus
sp_v2.0_unigene39076 SustainPine v2.0 535
AutoFact: DNA polymerase A family protein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C6J5_ARATH 0.0
FL-Next: tr=At1g50840/F8A12_8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase 0.0
Internal
sp_v2.0_unigene39812 SustainPine v2.0 679
AutoFact: Werner Syndrome-like exonuclease [Arabidopsis thaliana] sp|Q84LH3.1|WEX_ARATH RecName: Full=Werner Syndrome-like exonuclease gb|AAO33765.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana] gb|AAR24686.1| At4g13870 [Arabidopsis thaliana] gb|AEE83339 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease 7.90178e-41
Putative N-terminus
sp_v2.0_unigene42001 SustainPine v2.0 904
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 3.0e-28
FL-Next: tr=3-5 exonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 3 -5 exonuclease domain-containing protein 1.19604e-36
Putative C-terminus
sp_v2.0_unigene48215 SustainPine v2.0 397
AutoFact: DUF82 domain containing protein 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: probable exonuclease mut-7 homolog 2.81241e-42
C-terminus
sp_v2.0_unigene56241 SustainPine v2.0 266
AutoFact: OSJNBb0034I13.15 protein n=1 Tax=Oryza sativa RepID=Q7XND0_ORYSA 1.0e-20
FL-Next: tr=Putative uncharacterized protein Sb07g004810; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: like dna polymerase 3.03442e-21
Internal
sp_v2.0_unigene61843 SustainPine v2.0 923
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
Complete
sp_v2.0_unigene66944 SustainPine v2.0 375
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 1.0e-18
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 1.81036e-28
Internal
sp_v2.0_unigene67853 SustainPine v2.0 312
AutoFact: 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21257.1| At5g24340 [Arabidopsis thaliana] dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana] gb|AED93295.1| 3' 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: probable exonuclease mut-7 homolog 3.48117e-37
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain